Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 8e-12 >seq18 Length=80077792 Score = 84.2 bits (92), Expect = 8e-12 Identities = 183/267 (69%), Gaps = 9/267 (3%) Strand=Plus/Minus Query 31028 ATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGAACAGTGCGTCCGCGATCTGGTCT 31087 || |||||| ||| ||| || |||| | || | ||| ||||| || | |||| Sbjct 66650938 ATCACCACAATCACGGCCTGTGCGCCCAGCTTGTCCACCAGGGCGTCTGCAACCTGGCTG 66650879 Query 31088 GTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGGCGGGACAGCTTG 31147 || || || |||||||||||| | || |||| ||| |||| ||||||| | || |||| Sbjct 66650878 GTCAGACGCTCCTGCACTTGCGGACGCTTAGCAAACAAGTCCACCAGGCGCGCCAACTTG 66650819 Query 31148 CTCAGGCC---CAC--GATACGAC-CGTTCGGAATGTAGCTGATCGTGACCG-TGCCGAA 31200 || || ||| | ||| || |||||| |||| ||| ||| || ||||| Sbjct 66650818 GACAATCCGGTCACCTGGCCGGACTCGCCCGGAATATAGCCGAT-GTGGGCGACACCGAA 66650760 Query 31201 GATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCAT 31260 || |||| | || || |||||||| || ||||| || ||||| || ||| ||||| Sbjct 66650759 GAACGGCACAAGATGGTGCTCGCAGGTGGAATAGATAGGAATGTCCCGGACCAGCACCAG 66650700 Query 31261 CTGGTCATGCTTCTCCG-CACCGTCTT 31286 || | || ||||||| | |||||| Sbjct 66650699 CTCCTGGTGATTCTCCGAAAACGTCTT 66650673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289544398400