Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 5e-14 >seq18 Length=80077792 Score = 91.5 bits (100), Expect = 5e-14 Identities = 197/294 (67%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 39189 AAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGA 39248 ||| | || || |||||||| || || |||||||| ||||| ||||||||| ||||| Sbjct 73247059 AAGGTGACAAATTCCTTGGCTAGCACTTCGGGCTTTTTCTTACCCATGGCTTTGCGGAAT 73247000 Query 39249 AGGTCGGCCTGACCCAGGCTGTACCCAGCGAGGATCTGTGC----CGCCTTCTGCACCTG 39304 ||| || || || | |||| || | | || | ||| | | ||| Sbjct 73246999 CCGTCTGCTTGTCCGGCGGTGTAGTTGGCCACTTTTTGAGAAATACGCATGAT----CTG 73246944 Query 39305 CTCCTGGTAGATGACCAGCCCGTAGGTCGGCCCCAGGATCTCGGCAAGCGGCTCCTCCAC 39364 ||| ||||| | || ||| || || || | || || || || || || || | Sbjct 73246943 CTCTTGGTACACGATCAGACCATAAGTTTCGTCGAGAATTTCCCGCAGTGGTTCTTCAAG 73246884 Query 39365 CTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTG 39424 ||||||||||| |||||||| | | | | ||| |||||| |||||| | ||| Sbjct 73246883 TTCGGGGTGGATGGGCGTGATTTCTTCGCGGCGGTTTTTGCGGTCGGCGTACGCCCAGTG 73246824 Query 39425 CGAGCCCACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCGCTGATGTC 39478 || |||||| ||||| || || || ||||||||||||| ||||| |||||| Sbjct 73246823 CGCGCCCACACCCATGGGCCCGGGGCGGTACAGCGCGAGAGCGGCGACGATGTC 73246770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160140752458200