Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031936.1 Length=49979 Score E Sequences producing significant alignments: (Bits) Value seq18 105 2e-18 >seq18 Length=80077792 Score = 105 bits (116), Expect = 2e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41760 CCCGCTGTTCGACGTTGGGAACGAGTAACCAGGCCCGCACCCGCACCGACCGAACTCAAC 41819 ||||| | || || |||||| | |||||||| |||||| ||| || | ||| Sbjct 46300844 CCCGCGATCCGGCGATGGGAAGCCTTGACCAGGCCAGCACCCAACCCGGTTGAGATGAAC 46300785 Query 41820 AGCAACGACCGGCCCCGCCTCAATGCCGCGTTCGCCGAATGGATGATGGGCCTCCCCGCC 41879 |||| | ||||| || || ||| |||||| ||| |||||||||||||||||| Sbjct 46300784 CGCAATGCGCGGCCGCGTCTTTCTGCGGCGTTCAGCGAGTGGATGATGGGCCTCCCCTTG 46300725 Query 41880 GGCCATGTCACCGCGGTACCCGGCCTGTCCCGTGCCGACCAGTTGAAGGCGATCGGTAAC 41939 || |||||||| | || || || || ||||| | | |||||||| || ||||| ||| Sbjct 46300724 GGGCATGTCACTGGCGTGCCGGGGCTATCCCGCACGGCACAGTTGAAAGCCATCGGGAAC 46300665 Query 41940 GGGGTGTGCCC 41950 ||||| ||||| Sbjct 46300664 GGGGTCTGCCC 46300654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159811152556050