Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq176 82.4 7e-11 >seq176 Length=1137095 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 28952 TAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAAC 29011 ||| || || ||||| || ||| | ||||| | || || || ||||| ||| || Sbjct 797492 TAGCGTGAAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGT 797551 Query 29012 GGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCC 29071 ||| ||| || || | | | | ||| ||| ||| ||||||||||| | || Sbjct 797552 GGAGCCCAGTGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCC 797611 Query 29072 CGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGC 29131 || || || || || |||||||| |||||||| ||||||||| | || || | Sbjct 797612 TCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTC 797671 Query 29132 CGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||| ||||| || |||||||| || || || ||| ||||| Sbjct 797672 CGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 797711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428228293841960