Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq20 82.4 9e-11 >seq20 Length=3529460 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 83262 AGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGT 83321 |||| |||| ||||||| |||| |||||||| ||||||||||| || | | |||| Sbjct 284987 AGGCAAAGACTGGATGTGTGTTTGCTCCGTTGACATCGCACTTCTCAAACAAGGTGAAGT 284928 Query 83322 TCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 | |||| |||||| | || || || ||||||| ||| ||| ||| ||||| |||| Sbjct 284927 TGGGCTTGAAGCCACTGCCTGGTCGCACGTGCTGCAGTGAATGCAGAATCTCACCATT 284870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608639791305280