Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 1e-13 >seq28 Length=3093535 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || || ||||| | || | || | |||||| || ||||| ||||||||||| || ||| Sbjct 1719930 TGTGCAATCATGTAGGTGAGAAGTGCATAGCTGGCGATGTTGAAAGGCACCCCCAGACCC 1719989 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 || || || || | || || | ||||||||| |||| || || || || || |||||| Sbjct 1719990 ATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAGACGTAGAACTGA 1720049 Query 97243 CTCAATACATGACAGGGGGGCAACGCCATT 97272 | | | || |||||||||| ||||||| Sbjct 1720050 CAGAGGGCGTGGCAGGGGGGCAGCGCCATT 1720079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346696800296240