Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 5e-12 >seq28 Length=3093535 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 |||| ||||| |||| || || ||||| || ||||| ||||| || |||||||| || | Sbjct 1720023 TGTCCTGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGGGTGCCTTTCAACATCG 1719964 Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 | || ||||| || || || || ||||||||||| |||||| Sbjct 1719963 CCAGCTATGCACTTCTCACCTACATGATTGCACACATTACAG 1719922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399083624185240