Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 1e-13 >seq54 Length=2421293 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| || ||| | ||||||||||| || ||| | || || ||| | ||| Sbjct 1259450 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAACCCAGC 1259509 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | || |||| ||||| | ||||| ||| | || ||||||| Sbjct 1259510 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 1259569 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | || | ||| |||||||| ||||||||| | || || ||| |||| | Sbjct 1259570 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 1259629 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || |||||||| |||| || || Sbjct 1259630 ATCCAGAAAGAATCCACCCTCCA 1259652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418198816413440