Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9982 89.7 5e-13 >seq9982 Length=962 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| || || | ||||| ||| | |||||| | || | ||| | Sbjct 717 AACATGCAGATCTTTGTCAAGACCCTCACTGGTAAAACCATCACCCTGGAGGTGGAACCC 776 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||||||||| ||| | ||||| || || || || || || || || || || Sbjct 777 AGCGACACCATTGAGAATGTCAAGGCTAAAATCCAGGATAAGGAGGGCATCCCCCCTGAC 836 Query 26886 CAACAAAGACTCATTTACGGCGGCAAA-CAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || || || || | | ||||||| || || ||||||| | | | | |||||| Sbjct 837 CAGCAGAGGCTGATCTTTGCCGGCAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTA 896 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || |||||||||||| |||| || ||||| Sbjct 897 CAACATCCAGAAAGAATCTACTCTCCACCTTGTCCT 932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478538952967040