Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2055 89.7 4e-13 >seq2055 Length=21616 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 1190 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 1249 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 1250 CATAACTGATTTAATGAGCCATTCG 1274 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 1190 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 1249 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 1250 CATAACTGATTTAATGAGCCATTCG 1274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396962557666864