Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=7907290 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACACAACGCCAACAG 108533 || ||| ||||||| ||||| ||||| || || |||| | ||||| ||||||||||| || Sbjct 747972 GACCACCGGGTTCATCACAAATACTCGGAGACAGACG-CAGACCCTCACAACGCCAAAAG 747914 Query 108534 GGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGATC 108591 ||| |||| ||||| ||| | || ||||| || || ||| | |||||||| ||| Sbjct 747913 GGGCTTCTTCTTCTCCCACATCGGCTGGCTGCTGGTGCGCAAACATCCCGACGTCATC 747856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381676802275008