Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq19287 138 3e-28 >seq19287 Length=504 Score = 138 bits (152), Expect = 3e-28 Identities = 257/373 (69%), Gaps = 12/373 (3%) Strand=Plus/Plus Query 30384 GATCGGTGTCGGCTGCCGCGCGCACGCCATTCCAGCCGATCATGATCCGATCGAGCGCCG 30443 |||||||||||| | | ||| ||||| ||||||||||||||| || || ||| || Sbjct 21 GATCGGTGTCGGGTTCGGCGGTGGTGCCATGCCAGCCGATCATGATGCGGTCCAGCCCCT 80 Query 30444 CGCGTCGAATGATCGCGTCGCGCAGACGAGCCTGGAAGTCCGGGAACTTCGCCCAGGCGT 30503 || | ||| ||||| || | ||| | ||||||||| |||||||| |||||||||| Sbjct 81 GACGGGTGAGGATGGCGTCACGAACACGGGTCTGGAAGTCGGGGAACTTGGCCCAGGCGT 140 Query 30504 CGAGGCGCTGATACGTGATGTGCGTGTCGTAGTTCGTCTTCTCGGCGC---GATAGCGTT 30560 ||| | || ||||| || |||||| |||| | ||| ||||| |||| | Sbjct 141 CGATCTGGCCGTAGGTGATCTGGGTGTCGAAGTTGG---TCTGGGCGCATTCGTAGCTCT 197 Query 30561 GGCTGTCGAG--CGT-CGCGATGTCGCGCGTTTCGCGCTCACGCTTGCTCGTGTCGGTGC 30617 || || ||| ||| || | ||| | || | ||| || || |||| ||||| Sbjct 198 GGTCGTAGAGACCGTGCGGGTTGTTGGGC---TGGCGGTCTTTGGTGTCGGTGTTGGTGC 254 Query 30618 GGCTCGCGGACGGCCCCGAAACGCCGAGGCCGACCTTCTCGCCTTCCATCTCGGTCACGC 30677 | | ||| | | | | ||||| |||||||| | ||||| ||| || || Sbjct 255 GACCGGCGATGGTGCTGGTGATGCCGATACCGACCTTTTGGCCTTTCATTTCATCGACAG 314 Query 30678 CGATCACGTTGATGCTGTTCAGGAAGGCGCTCGATTCCTGCGTCTTGGTTTCGAGCGTCT 30737 ||| |||||||| | ||||||||| ||| |||||| |||||||||| || |||| Sbjct 315 GGATGACGTTGATCATCCCGAGGAAGGCGACCGACTCCTGCATCTTGGTTTCCAGGGTCT 374 Query 30738 GCTGCACGGTCGG 30750 |||| |||||||| Sbjct 375 GCTGGACGGTCGG 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119004436172832