Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq19287 143 7e-30 >seq19287 Length=504 Score = 143 bits (158), Expect = 7e-30 Identities = 247/349 (71%), Gaps = 10/349 (3%) Strand=Plus/Plus Query 26981 GCCGTTCCAGCCGATCATGATCCGGTCGAG-CGCAGACTGGTTGAGGATCACATTGCGGA 27039 ||| | ||||||||||||||| ||||| || | | ||| || ||||||| | | || | Sbjct 46 GCCATGCCAGCCGATCATGATGCGGTCCAGCCCCTGAC-GGGTGAGGATGGCGTCACGAA 104 Query 27040 TGCGTTGCTGGAAGTCGGGGAATTTCGCCCAGGCGTCGAGCTTGCGGTACGTAATGGCCG 27099 || ||||||||||||||| || ||||||||||||| || || ||| || || | Sbjct 105 CACGGGTCTGGAAGTCGGGGAACTTGGCCCAGGCGTCGATCTGGCCGTAGGTGATCTGGG 164 Query 27100 TGTCGTAGTCGGTTTTCTCGCAGCGGTAGCGGTTGCTGTCCAGCGCCGT-CGGGTCGATC 27158 ||||| ||| ||| | |||| ||||| | | || || |||| ||||| | | Sbjct 165 TGTCGAAGTTGGTCTGGGCGCATTCGTAGCTCTGGTCGTAGAG-ACCGTGCGGGTTGTTG 223 Query 27159 GGCTGGCGTTCGGCCTTCGTC-GTGTCGGTGCGGCTCGCGATCGGACCG--GATACCGAC 27215 |||||||| || | ||| |||| |||||| | ||||| | | | ||| |||| Sbjct 224 GGCTGGCGGTCTTTGGT-GTCGGTGTTGGTGCGACCGGCGATGGTGCTGGTGATGCCGAT 282 Query 27216 AGGCCGAGCTTTTCGCCTTCCAGCTCGGTCACGGGCAGGATGTTGATGCTCTTCAGGAAT 27275 | |||| ||||| ||||| || || || || | || |||||| || ||||| Sbjct 283 A--CCGACCTTTTGGCCTTTCATTTCATCGACAGGGATGACGTTGATCATCCCGAGGAAG 340 Query 27276 GCGCTCGATTCCTGCATTTTGGTTTCGAGCGTTTGCTGGACGGACGGCT 27324 ||| ||| |||||||| |||||||| || || |||||||||| ||||| Sbjct 341 GCGACCGACTCCTGCATCTTGGTTTCCAGGGTCTGCTGGACGGTCGGCT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129622634023728