Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq19287 111 3e-20 >seq19287 Length=504 Score = 111 bits (122), Expect = 3e-20 Identities = 260/388 (67%), Gaps = 16/388 (4%) Strand=Plus/Plus Query 23070 CCGATCGCGATGCGGTCGAGCGCTTGACGGCGCACGATCACGTCGCGAATGCGGGTCTGG 23129 |||||| ||||||||| ||| | |||||| | ||| |||| |||| ||||||||| Sbjct 56 CCGATCATGATGCGGTCCAGCCCCTGACGGGTGAGGATGGCGTCACGAACACGGGTCTGG 115 Query 23130 AAGTCGGGAAACTTCGCCCACGCGTCGAGCAGCGCATACGTGATGTGCGAGTCGAAATTC 23189 |||||||| ||||| ||||| ||||||| | | | || ||||| || | |||||| || Sbjct 116 AAGTCGGGGAACTTGGCCCAGGCGTCGATCTGGCCGTAGGTGATCTGGGTGTCGAAGTTG 175 Query 23190 GTTTGCGTGCAGTTGTAACCGTTCTCGTCGAGGTCGGTCACATCAGCCGTTGCGCGATCC 23249 || || | ||| | ||| | | |||| ||| || | | |||| || | Sbjct 176 GTCTGGGCGCATTCGTAGCTCTGGTCGTAGAGACCGTGC----GGGTTGTTGGGCTGGCG 231 Query 23250 TTCTGCGTCGTGTCGGTCGTGCTCGCGATCGGCGA-------GCCGACGCCGAGGCCGAG 23302 ||| | |||||||| || | |||| |||||| | || ||||| |||| Sbjct 232 GTCT--TTGGTGTCGGTGTTGGT-GCGACCGGCGATGGTGCTGGTGATGCCGATACCGAC 288 Query 23303 CTTTGCGCCTTCCTTGTCGGTCACGCCGATAACGTTGATGCGTTTC-AGAAAGTCGCTCG 23361 |||| ||||| | | || || ||| |||||||| | | | || ||| || || Sbjct 289 CTTTTGGCCTTTCATTTCATCGACAGGGATGACGTTGAT-CATCCCGAGGAAGGCGACCG 347 Query 23362 ATTCCTGAATGCGGGTTTCGAGCTTTTGTTGCACGCTCGGCGACACGGCGAATTTCTTCG 23421 | ||||| || |||||| || | || || ||| ||||| |||| ||| | | | Sbjct 348 ACTCCTGCATCTTGGTTTCCAGGGTCTGCTGGACGGTCGGCTGCACGTTGAACTGCACCA 407 Query 23422 TCGCGTTCGGGATGCCGTTGAGCTTGGC 23449 | ||| | | |||| ||||||| ||||| Sbjct 408 TGGCGCTGGTGATGGCGTTGAGTTTGGC 435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103267492747536