Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq9982 86.0 5e-12 >seq9982 Length=962 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||| ||||| || ||||| || || | || ||||||||||| ||| || |||||| Sbjct 716 AAACATGCAGATCTTTGTCAAGACCCTCACTGGTAAAACCATCACCCTGGAGGTGGAACC 775 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || | | || ||||| |||||| || || ||||| | ||| || Sbjct 776 CAGCGACACCATTGAGAATGTCAAGGCTAAAATCCAGGATAAGGAGGGCATCCCCCCTGA 835 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAA-CAATTGGAAGATTCTAAAACTATGGCCGATT 28728 || ||||| || |||||||| |||||| || |||||||| || || |||| | Sbjct 836 CCAGCAGAGGCTGATCTTTGCCGGCAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACT 895 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCAC 28757 | ||||| || |||||||||||||| ||| Sbjct 896 ACAACATCCAGAAAGAATCTACTCTCCAC 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425297830899528