Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq12615 145 7e-30 >seq12615 Length=735 Score = 145 bits (160), Expect = 7e-30 Identities = 195/266 (73%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 130789 ATTAGTTGTAGGCACAGGTAACAAAGTAGAAGATTTTGGTGTAGGTTTCTATACTAAGTA 130848 |||||||| ||| ||||| |||||||| |||||||||||||| ||||| |||||||| || Sbjct 415 ATTAGTTGCAGGTACAGGAAACAAAGTCGAAGATTTTGGTGTGGGTTTTTATACTAAATA 356 Query 130849 TGGTGATGGTGGTGTTGATATATCACCTATTGCAGATTGTATGAAAA-CAGATGTATGGA 130907 ||||||||| || || || || || |||||||||| ||| |||| ||||||| | Sbjct 355 TGGTGATGGCGGAGTAGACCTAAGTCCAATTGCAGATT-TATTAAAATCAGATGTGTATG 297 Query 130908 AAATTGCAAAAGAATTAAATATATTACAATCAATACAAGAGGCAAAACCAACAGATGGT- 130966 | | | | || | ||||| || | | ||||| | | || ||| ||||||||| Sbjct 296 CATTAGGAGAATATTTAAAAATTCCAAATTCAATTCTTGTTGCGGCACCCACAGATGGTC 237 Query 130967 TTATGGGACGATGGAAGAACAGATGAAGACCAACTTGGTATGAGTTACGAAGAATTAGAA 131026 || | ||| || | | |||| ||||||||||||||| ||||| || ||| | ||| Sbjct 236 TTTTTGGA-GACGACCGTTCAGACGAAGACCAACTTGGTGCAAGTTATGATGAACTCGAA 178 Query 131027 AAAGCAATGAAGCAAGACCAAATGGG 131052 || ||| ||||||| |||| || Sbjct 177 TGGGCCATGTTGCAAGACGAAATTGG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471059282471680