Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq364 125 6e-24 >seq364 Length=487702 Score = 125 bits (138), Expect = 6e-24 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || |||||||| || || ||||||| |||||| || | |||||| |||||| Sbjct 371099 AGGTCAGTTTCAGGGTTGTCGCACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 371158 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| ||||| ||||| | || ||||| |||||||||||| | || ||||||||| Sbjct 371159 AGCATATCCTGCAACTTGTTCGCCTCATGGGATCCGTTGACGATGTAACGATCGTTTTTG 371218 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| ||||||| Sbjct 371219 GTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGGGT 371270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412737789947576