Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq176 96.9 3e-15 >seq176 Length=1137095 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| ||||| || ||||| | || || || ||||| ||| | || |||| | Sbjct 797499 AAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCC 797558 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | ||||| | | | || || ||||||| |||||||||||| | || || Sbjct 797559 AGTGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGAC 797618 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || ||||||||||| || | | || || | |||||| Sbjct 797619 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 797678 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| || |||||||| || | ||| ||||| Sbjct 797679 AACATCCAGAAGGAGTCCACCCTCCACCTGGTG 797711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398776501431448