Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq19287 143 6e-30 >seq19287 Length=504 Score = 143 bits (158), Expect = 6e-30 Identities = 273/395 (69%), Gaps = 9/395 (2%) Strand=Plus/Minus Query 5736 AGCCGACTGTGCAGCAGAGCCTCGAAGCCCGCATGCAGGAAAGCAGTA-CCTTCCTGCAG 5794 ||||||| || ||||||| ||| ||| || |||||||| | || ||||||| | Sbjct 389 AGCCGACCGTCCAGCAGACCCTGGAAACCAAGATGCAGGAGT-CGGTCGCCTTCCTCGGG 331 Query 5795 GCGATCAACATGGTCGGCGTGAACGAACTGAAGGGCCAGAAGGTTGGCGTTGGCATCACC 5854 ||||||| | || || | ||| |||| ||||| ||||| || | ||||||||| Sbjct 330 ATGATCAACGTCATCCCTGTCGATGAAATGAAAGGCCAAAAGGTCGGTATCGGCATCACC 271 Query 5855 GGCACCATTGCCGGCCGCACCGACACCAGCGGCAACGGCGAGCGCAATCCGTCCGATCCG 5914 ||||||| ||||| |||||| ||||| | ||| | | ||| | || | | ||| Sbjct 270 AGCACCATCGCCGGTCGCACCAACACCGACACCAAAGAC---CGCCAGCCCAACAACCCG 214 Query 5915 ACC--TCGCTGGTGTCCAACACCTACGAGTGCCAGAAGACCGACTTTGACACCGCCCTGC 5972 | || || | ||| | |||||| ||| ||||| |||| |||||| | Sbjct 213 CACGGTCTCTAC-GACCAG-AGCTACGAATGCGCCCAGACCAACTTCGACACCCAGATCA 156 Query 5973 CCTATGCCCGCCTGGACGCCTGGGCGCATCGCCCCGAGTTCCAGACCCTGATCCGCGACG 6032 |||| | || | ||||||||||| | |||||| |||||||||| | || |||| Sbjct 155 CCTACGGCCAGATCGACGCCTGGGCCAAGTTCCCCGACTTCCAGACCCGTGTTCGTGACG 96 Query 6033 CGATCATCCAGCGCCAGGCACTGGACCGGATCATGATCGGCTGGCACGGCACCAGCATTG 6092 | ||| || || |||| |||||||| ||||||||||||||||| ||||||| | | Sbjct 95 CCATCCTCACCCGTCAGGGGCTGGACCGCATCATGATCGGCTGGCATGGCACCACCGCCG 36 Query 6093 CCATCAACACCGACCGCGTCGCCAATCCGATGCTG 6127 | ||||||| ||| |||| |||| ||||| Sbjct 35 AACCCGACACCGATCGCAACGCCCATCCCCTGCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107132145656208