Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq28 149 7e-31 >seq28 Length=3093535 Score = 149 bits (164), Expect = 7e-31 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||||||||| || | |||||||| |||||||| Sbjct 1719914 CTTGAGTCCTGTAATGTGTGCAATCATGTAGGTGAGAAGTGCATAGCTGGCGATGTTGAA 1719973 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || |||||||| |||||||| | || | |||||||||||| || || ||||||||||| Sbjct 1719974 AGGCACCCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTC 1720033 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 | ||||| ||||| || ||| |||||| || ||||||||||| ||| ||||| || Sbjct 1720034 GCAGACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATTATGGGGAGGTCTGC 1720093 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||| ||| | |||||| ||||| ||||| |||||||||||||| || || ||||| |||| Sbjct 1719760 CCACCTGCACTTTCAGAGGCTCAACGTGATTGAGGTAGACGTGAGCATCTCCCAGAGTGT 1719819 Query 146966 GCACAAAGTCCCCCGGCT 146983 | |||||||| || |||| Sbjct 1719820 GGACAAAGTCACCGGGCT 1719837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583337518444800