Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq63 289 9e-73 seq176 149 2e-30 seq54 131 5e-25 seq629 123 8e-23 seq4001 102 2e-16 seq27 98.7 3e-15 seq594 93.3 1e-13 seq674 84.2 7e-11 >seq63 Length=2302000 Score = 289 bits (320), Expect = 9e-73 Identities = 957/1474 (65%), Gaps = 23/1474 (2%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || |||||| | || || || || |||||||| | || | || ||| || Sbjct 318817 ATTGGCATCGATCTGGGCACCACCTACTCTTGTGTCGGGGTCTTCCAGCATGGAAAAGTG 318876 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| || || ||||||||||| ||||| ||||| || ||||| || |||||||| Sbjct 318877 GAAATTATCGCCAATGATCAAGGCAACAGGACAACTCCCAGCTACGTGGCCTTTACCGAC 318936 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || ||| | | ||||| ||| |||| || || |||| ||| || || | || || Sbjct 318937 ACAGAGAGGCTCATTGGGGATGCTGCCAAGAACCAAGTTGCCATGAACCCCACCAACACA 318996 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 | |||||||| || || || ||||| ||||| ||| |||| || ||||| Sbjct 318997 ATCTTTGATGCCAAACGGCTCATTGGAAGAAGGTTTGATGACCTGGTGGTCCAGTCTGAC 319056 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | |||| | || || | || | || || ||| | || || | | |||| Sbjct 319057 ATGAAACTCTGGCCCTTCAAGGT-GATC--AACGACAACGGAAAGCCCAAAGTCCAGGTG 319113 Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 ||||||||||| ||| || ||| | || ||||| ||||| || ||||| | ||| Sbjct 319114 GAATATAAAGGAGAAATTAAGACATTCTGTCCTGAAGAGATTTCCTCGATGGTCCTGGTT 319173 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||| ||||| || || || | | | || | | || | |||| || || || Sbjct 319174 AAAATGAGAGAAATAGCGGAGGCCTTTCTGGGACAGAGGGTGTCGAATGCGGTCATCACA 319233 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || ||||| || ||||||||| |||| | || ||||| |||||||| || | Sbjct 319234 GTGCCAGCTTACTTTAATGATTCCCAAAGGCAAGCCACAAAGGATGCTGGAGTGATCTCC 319293 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || |||||||||| | || || ||||| || || |||||||| ||||| || || ||| Sbjct 319294 GGACTAAATGTTCTCCGCATCATAAATGAGCCGACAGCTGCAGCCATTGCCTACGGCCTT 319353 Query 349742 GATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 |||||| | || | ||| ||| | || || ||||| | ||||| || ||| Sbjct 319354 GATAAAGGCAAAAGAG---GAGAGCGCAATGTCCTCATCTTTGACCTTGGTGGAGGCACT 319410 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 ||||| || || | || || |||| || || || ||||| || ||| | || || || Sbjct 319411 TTTGACGTGTCCATCCTGACCATTGAGGATGGCATATTTGAGGTGAAATCCACGGCCGGG 319470 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || ||||| || || ||||| |||||||| || || | || || ||||| | || Sbjct 319471 GACACACACCTCGGCGGAGAGGATTTTGACAACCGAATGGTCAGCCACTTTGTGGAGGAG 319530 Query 349919 TTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAG 349977 ||||| | |||| || | || || | | || |||||| || | | || | Sbjct 319531 TTTAAAAG-AAAGCACAAGAAGGACATCAGCCAGAACAAGAGAGCAGTGAGGAGACTGCG 319589 Query 349978 AACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAAT 350037 || || ||||| | || ||| | |||| || || | || || | ||||| || Sbjct 319590 CACAGCTTGTGAGAGAGCAAAGAGGACCTTGTCCTCCAGCACTCAGGCAAGCATTGAGAT 319649 Query 350038 TGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097 ||| || || ||| |||| || || | | || || ||| | || || || || || Sbjct 319650 TGACTCACTCTTTGAGGGCATTGACTTTTACACCTCGATCACAAGGGCACGCTTCGAGGA 319709 Query 350098 ATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGC 350157 | || || ||||| | |||| |||| || || || || | || ||||||| Sbjct 319710 GCTCAACTCAGACCTCTTTAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTACAAGATGC 319769 Query 350158 AAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 || || | ||||| |||| ||||||| || |||||||||| |||||| | || Sbjct 319770 TAAGCTG--GATAAATCCAAGATCCATGAAGTTGTCCTAGTTGGTGGCTCTACAAGAATC 319827 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAAT 350274 || ||| | ||| || | || || || || ||||| | ||||| | ||| | || Sbjct 319828 CCCAAAATCCAAAAGCTCCTGCAGGACTTCTTCAATGGTAGAGAACTAAACAAGAGC-AT 319886 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 || || |||||||| || || |||||||| || || ||||| |||| | ||| Sbjct 319887 CAACCCTGATGAAGCAGTGGCCTATGGTGCAGCAGTCCAGGCTGCTATCCT-CATGG--G 319943 Query 350335 TAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | | || ||| || | ||| || | || || ||||| | || | ||||| || Sbjct 319944 TGACACCTCAGAAAATGTCCAAGATTTACTGCTCCTGGATGTGGCACCCTTGTCGCTGGG 320003 Query 350392 ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTAC 350451 | || || | |||| || ||||| |||||| |||| | || | || || Sbjct 320004 CATTGAGACAGCCGGTGGCGTTATGACACCTCTTATCAAGCGAAACACCACCATCCCCAC 320063 Query 350452 AAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 ||| || | || | || || |||| ||||||| ||||||| || ||||| || Sbjct 320064 AAAGCAGACTCAGATCTTCTCCACATACTCAGATAACCAGCCAGGAGTCCTGATTCAGGT 320123 Query 350512 ATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 | ||||||||| | || || || || || ||| || || | ||| || Sbjct 320124 CTATGAAGGTGAGAGAGCCATGACAAAGGACAACAATCTCCTGGGGAAGTTTGAGCTCTT 320183 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 | |||| || || ||||| || || ||||| ||||| | || |||||||| | Sbjct 320184 GGGTCTTCCTCCTGCTCCCAGAGGCGTGCCACAGATCGAAGTTACCTTTGATATTGACGC 320243 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAA 350665 || || || |||| || | || || || ||| Sbjct 320244 CAACGGCATCCTAAACGTGTCTGCCGTCGACAAA 320277 Score = 147 bits (162), Expect = 7e-30 Identities = 564/879 (64%), Gaps = 14/879 (2%) Strand=Plus/Minus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 || |||| || || || | ||||| |||||| | ||||| |||||||| || |||| Sbjct 320261 ACGTTTAGGATGCCGTTGGCGTCAATATCAAAGGTAACTTCGATCTGTGGCACGCCTCTG 320202 Query 182979 GGCATTGGTGGAATTCC----AGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGT 183034 || || |||| || || | || | ||| || | ||| || || || || Sbjct 320201 GGAGCAGGAGGAAGACCCAAGAGCTCAA---ACTTCCCC-AGGAGATTGTTGTCCTTTGT 320146 Query 183035 TCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGT 183094 | |||||||| |||||||| || ||||| ||| ||||||| ||||| || || Sbjct 320145 CATGGCTCTCTCACCTTCATAGACCTGAATCAGGACTCCTGGCTGGTTATCTGAGTATGT 320086 Query 183095 AGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCAT 183154 || || | || | | || | || || || | |||||| | || ||||| Sbjct 320085 GGAGAAGATCTGAGTCTGCTTTGTGGGGATGGTGGTGTTTCGCTTGATAAGAGGTGTCAT 320026 Query 183155 TACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATC 183214 || | | ||| || || | || | || || ||||| ||||| || | | |||||| Sbjct 320025 AACGCCACCGGCTGTCTCAATGCCCAGCGACAAGGGTGCCACATCCAGGAGCAGTAAATC 319966 Query 183215 T--GATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATAT 183272 | || |||| |||| | | | | | || ||||| || || ||||||||||| Sbjct 319965 TTGGACATTTT--CTGAGGTGTCACCCATGAGGATAGCAGCCTGGACTGCTGCACCATAG 319908 Query 183273 GCAACAGCTTCATCTGGGTTAATTGAACGAG-ATAATTCTTTGCCATTAAAAAATTCTGA 183331 || || |||||||| ||||| | || | | || |||| | ||||| || || || Sbjct 319907 GCCACTGCTTCATCAGGGTTGA-TGCTCTTGTTTAGTTCTCTACCATTGAAGAAGTCCTG 319849 Query 183332 AAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGAT 183391 || | | ||| ||||| || ||||| || || ||||| |||| || ||||||| ||| Sbjct 319848 CAGGAGCTTTTGGATTTTGGGGATTCTTGTAGAGCCACCAACTAGGACAACTTCATGGAT 319789 Query 183392 ATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCT 183451 || |||| | | | ||||| || | || ||||| || |||| ||| || Sbjct 319788 CTTGGATTTATCCAGCTTAGCATCTTGTAGGGCCTTCTCAACTGGCTCCAGTGTTCCCCT 319729 Query 183452 AAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAAT 183511 ||| | ||| | ||| || || | ||| || || | || | |||||||||| Sbjct 319728 AAAGAGGTCTGAGTTGAGCTCCTCGAAGCGTGCCCTTGTGATCGAGGTGTAAAAGTCAAT 319669 Query 183512 ACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTT 183571 || | | | | || ||||| ||||| || || || || || || || || || Sbjct 319668 GCCCTCAAAGAGTGAGTCAATCTCAATGCTTGCCTGAGTGCTGGAGGACAAGGTCCTCTT 319609 Query 183572 AGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTG 183631 |||| ||||| ||||| | |||| | | || ||| || | | || || | Sbjct 319608 TGCTCTCTCACAAGCTGTGCGCAGTCTCCTCACTGCTCTCTTGTTCTGGCTGATGTCCTT 319549 Query 183632 TTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTC 183691 || || ||||||||||| || | ||| || | | || | |||||||| || Sbjct 319548 CTTGTGCTTTCTTTTAAACTCCTCCACAAAGTGGCTGACCATTCGGTTGTCAAAATCCTC 319489 Query 183692 ACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATT 183751 || || | ||||| || || || || | ||| || |||||||| || || ||||| | Sbjct 319488 TCCGCCGAGGTGTGTGTCCCCGGCCGTGGATTTCACCTCAAATATGCCATCCTCAATGGT 319429 Query 183752 TAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | || || || ||||| || || ||||| | ||||| Sbjct 319428 CAGGATGGACACGTCAAAAGTGCCTCCACCAAGGTCAAA 319390 >seq176 Length=1137095 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || || |||||| Sbjct 797713 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 797654 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| ||||||||||| || | ||||| ||||||||||| |||||||||||| Sbjct 797653 TCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC 797594 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || || || ||||| | |||| || || || || || || | ||| Sbjct 797593 TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 797534 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| || ||||||||||| Sbjct 797533 TTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 797502 >seq54 Length=2421293 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||||| || || || || ||||| || || || || || || | || || |||||| Sbjct 1259661 AGAACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 1259602 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| ||||||||||| || | ||||| ||||| || || || ||||||||| Sbjct 1259601 TCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 1259542 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| || || || || ||||| | || ||||| || || || || | || Sbjct 1259541 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTT 1259482 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || ||||| || ||||| Sbjct 1259481 TTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 1259450 >seq629 Length=126638 Score = 123 bits (136), Expect = 8e-23 Identities = 355/538 (66%), Gaps = 6/538 (1%) Strand=Plus/Minus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || |||||| | |||||||| ||||||||||| || | | || | || || || Sbjct 38000 CTCATCTTTGATCTCGGTGGTGGCACTTTTGATGTTTCCATCTTGACCATCGAGGATGGG 37941 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || |||||||| ||| | |||||||| ||||| ||||||||||| ||||| ||||| || Sbjct 37940 ATCTTTGAAGTGAAATCCACTGCTGGAGATACTCATCTTGGTGGGGAAGACTTTGACAAC 37881 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA 349950 ||| | ||| || || || || || || || |||| || | || || | || Sbjct 37880 CGTATGGTTAACCACTTCATTGCTGAGTTCAAACG-CAAGTACAAGAAGGACATCAGCGA 37822 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || || ||| | || || | | ||||| ||||| || || ||||| || | || Sbjct 37821 CAACAAGAGGGCAGTCCGCCGTTTGCGTACTGCTTGTGAGCGGGCAAAGCGCACCCTGTC 37762 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | ||||| || ||||| || || ||||| ||| || || |||| | Sbjct 37761 TTCCAGCACCCAGGCCAGCATTGAGATCGACTCTCTGTATGAGGGAGTTGACTTCTACAC 37702 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 ||||| || | ||||| ||||| || | | ||||| || | | ||| | || Sbjct 37701 CTCTATCACCAGAGCTCGTTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGAACCCTCGA 37642 Query 350131 TCCTGTGGAAAAAGTAT-TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAG 350189 || |||| | |||| | | ||||| || ||| ||| ||||| |||| | | Sbjct 37641 CCCCGTGG-AGAAGTCTCTCCGTGATGCCAAGATGGATAAAGGCCAGATCCATGACATTG 37583 Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTA 350249 | || || || || || || ||||| || || | || || | || || || || | Sbjct 37582 TCTTGGTAGGCGGCTCCACCCGTATCCCCAAGATCCAGAAGCTGCTTCAGGATTTCTTCA 37523 Query 350250 ATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTG 350306 | || ||||| | | ||| | || || |||||||||||||| || || || |||| Sbjct 37522 ACGGAAAAGAGCTAAACAAGAGC-ATCAACCCAGATGAAGCTGTGGCTTACGGAGCTG 37466 >seq4001 Length=6841 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||||| || || || ||||| || || ||||| || || || | || || ||||| Sbjct 6678 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGGCCATCC 6737 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||| || || || || |||||| Sbjct 6738 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 6797 Query 140646 TGAATTTTAGCTTTTACATTATCAAT 140671 || || || || || ||||| ||||| Sbjct 6798 TGGATCTTGGCCTTGACATTCTCAAT 6823 >seq27 Length=3139199 Score = 98.7 bits (108), Expect = 3e-15 Identities = 113/151 (75%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||||| || || || || || || ||||| |||||||| || || ||||||| Sbjct 1248035 ATGCAGTTATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGATG 1247976 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||| | || | ||||| || | || || ||||||||||| || ||||| | Sbjct 1247975 CTGGTACCATCTCTGGCCTCAATGTGCTTCGTATTATCAATGAACCCACAGCCGCAGCCA 1247916 Query 349728 TTGCATATGGGCTTGATAAAATGAGTGACCA 349758 |||||||||| | || |||| | ||||||| Sbjct 1247915 TTGCATATGGCTTGGACAAAAAG-GTGACCA 1247886 >seq594 Length=163681 Score = 93.3 bits (102), Expect = 1e-13 Identities = 261/401 (65%), Gaps = 0/401 (0%) Strand=Plus/Minus Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 ||| |||| || || ||||| || | ||| || || || || || || || || ||| Sbjct 11499 ATTCAGGTGGAGTACAAAGGGGAGAACAAAGCCTTCTTCCCTGAGGAGATCTCCTCCATG 11440 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | || || ||||||||||| || || || || | || | | || | | || Sbjct 11439 GTCCTGGTGAAGATGAAGGAAATCGCCGAGGCCTACCTGGGCCACAAGGTGTCCAACGCC 11380 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || | || || || ||||| || || || ||||||| || || ||||| || ||| Sbjct 11379 GTGGTCACGGTCCCCGCCTACTTCAACGACTCCCAGCGACAGGCCACCAAAGACGCAGGC 11320 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||||||||| | || || | || || || || || ||||| || || || || || Sbjct 11319 GTCATTGCGGGACTCAACGTCTTGAGGATCATCAACGAGCCCACGGCGGCCGCCATCGCC 11260 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || ||| | ||| | ||| | || || ||||| | || || Sbjct 11259 TACGGTCTGGACAAAGGCAAGTCGGGAGAGAGAAACGTCCTGATCTTTGACCTGGGCGGA 11200 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || || || || || || | || || | || || || || ||||| || || || || Sbjct 11199 GGCACCTTCGACGTGTCCGTCCTGACCATCGAGGACGGCATCTTTGAGGTGAAGGCCACG 11140 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || || || || || | || ||||| || ||||| || || Sbjct 11139 GCCGGAGACACTCACTTGGGAGGAGAGGACTTTGACAACCG 11099 >seq674 Length=110129 Score = 84.2 bits (92), Expect = 7e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || || || || || || | ||| || |||||||| || |||||||||||||||| Sbjct 14250 CTTTCTGGATGTTGTAGTCTGACAGTGTGCGTCCATCTTCCAGCTGTTTTCCAGCAAAGA 14309 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| |||||||| || ||||| ||| Sbjct 14310 TCAGACGCTGCTGATCTGGGGGAATACCT 14338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514853846287496