Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq28 95.1 1e-14 >seq28 Length=3093535 Score = 95.1 bits (104), Expect = 1e-14 Identities = 122/164 (74%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAAAG 118591 || ||||| | ||| ||||||||||| || | || || |||||||| | || |||| Sbjct 1719918 AGTCCTGTAATGTGTGCAATCATGTAGGTGA--GAAGTGCATAGCTGGCGATGTTGAAAG 1719975 Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651 | || |||||||||||||| || || | |||||||| || || || ||||||||| | | Sbjct 1719976 GCACCCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCG-TCG 1720034 Query 118652 CA-ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 || || || ||||||| | | ||| || || ||||| |||| Sbjct 1720035 CAGACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 1720078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414372578772448