Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1240 105 5e-18 >seq1240 Length=519700 Score = 105 bits (116), Expect = 5e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| |||| | |||| ||| || ||||| || | | || ||||| || ||| ||| Sbjct 49085 GATCTCCCTCTGATGGCACTTCCCCCATGCCATGCTCTTTGCCAGTTCTATGTTCTCAAC 49026 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 |||||| || || || |||||||||||||||| ||||||||||| || || || ||| Sbjct 49025 AATGAATTGTCGTGTCAGCTATACCAGAGATCGGGAGATATGGGCCTAGGAGTGCCATTC 48966 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 ||||| || | ||||| | | ||||| || | || || ||||||||||| || Sbjct 48965 AACATAGCCAGTTATGCTTTATTAACCTATATGATCGCTCACGTTACAGGACTGAA 48910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399381360761460