Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1240 100 2e-16 >seq1240 Length=519700 Score = 100 bits (110), Expect = 2e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| || ||||| || ||||||||||| ||||| ||||| ||||||||||| ||||||| Sbjct 50315 CTTTGTACTCTGCACCAAAATGCCTCCATTGAAAACCATATACAGGTCCAAGGTCTCCTT 50374 Query 102093 CATCTCTGTCAT-AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAA 102151 | || | || || ||| || | ||||| || || ||| || ||||| |||||||| Sbjct 50375 CCTC-CCGTGATGTAAAGCCTTGCTTATCCAAGAACTCTCTGGAGCCATTTGCATCCCAG 50433 Query 102152 ATGTGCACGCCAGCTGCTGATAGCTCTTT 102180 || | ||| || | | || |||||||| Sbjct 50434 ATTTTCACCCCTTTTTCAGAAAGCTCTTT 50462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361140303558188