Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1511 113 8e-20 >seq1511 Length=392265 Score = 113 bits (124), Expect = 8e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| ||| ||| | || ||||| | || ||||| || || |||||||| ||||| ||| Sbjct 371970 TGGTGGTATTATGTCTCTAAAGGAGTGGAGTACTTTGACACAGTATTTTTTATACTGAGG 371911 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || ||||||||||| ||||||| || || || || ||||| | ||| |||||||| | Sbjct 371910 AAGAAATTTAATCACATTAGTTTCCTCCATGTGTACCATCACTGTACAATGTTTACCTTG 371851 Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 | ||||| || || || ||| | |||||||| || Sbjct 371850 TGGTGGATCGGAATCAAGTGGGTCGCTGGAGGACA 371816 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 52182 GTTGGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCC 52241 || ||| ||||||||| | |||| || |||||||| | || | ||||| ||||| || Sbjct 369406 GTAGGTCCAGTTCCATGTCACTATTGGCCATACTGCACTATCTCTCTACATTGATTGTCC 369347 Query 52242 GTTTCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTT 52301 |||||||||||||| || ||| | | ||| | ||| | | | |||||||| || || Sbjct 369346 TTTTCCAAAATGGATGCATTGGGCTTTGATTGTATATGCCGTCACCTTCATATTTCTCTT 369287 Query 52302 TGGTAACTTCTATTTTAGAACATACAA 52328 || ||||||||| | | | |||||||| Sbjct 369286 TGCTAACTTCTACTATCGGACATACAA 369260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922906131487520