Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq425 93.3 4e-14 seq16 89.7 5e-13 >seq425 Length=1236905 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || |||| || || || ||||| ||||| ||||| | ||||| || || Sbjct 157413 TCATCTCTGCTGATTAGTTCATTAGAGAATGTGAGACCAGGCATCAACCCTCGCTTCTTC 157472 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| || || || |||||||| ||||| || || || || || || || ||||||||| Sbjct 157473 AGCCAGAAGATGGCTGCAAATGATCCAGAGAAAAAGATTCCCTCCACAGCAGCAAATGCA 157532 Query 16379 ACCAATCGCTCACC 16392 |||| |||||||| Sbjct 157533 ACCACACGCTCACC 157546 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 15926 TTTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTT 15985 || ||||| || ||| || |||||||||| |||| |||| ||||||||||| || || Sbjct 155347 TTGGACATGACCCCCATCTTCTGATATTCACCAACTTTCTTCTCAAAGAAATTGGTCTTC 155406 Query 15986 CCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTG 16028 ||||| | |||||| || ||||| || ||||| ||||||| || Sbjct 155407 CCTTCCAGTGAAATGTTCTCCATGAAGTCAAATGGATTTTCTG 155449 >seq16 Length=4132212 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 ||||| | || || | ||| || || || || ||||| ||||| || |||| || || Sbjct 2457842 TCGTCTCGGCTGATGAGCTCATTGGAGAAGGTGAGACCGGGCATCAGACCTCTCTTCTTC 2457901 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| || | ||| ||||| || ||||||||||| || ||||| || |||||||| || Sbjct 2457902 AACCAGAAAACAGCAGCAAAGGAGCCAGAAAAGAAGATTCCTTCTACCGCGGCAAACGCC 2457961 Query 16379 ACCAATCGCTCACC 16392 |||| ||| || || Sbjct 2457962 ACCACTCGTTCTCC 2457975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462366378096800