Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq82 246 2e-60 >seq82 Length=2563694 Score = 246 bits (272), Expect = 2e-60 Identities = 623/940 (66%), Gaps = 12/940 (1%) Strand=Plus/Minus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 ||||| || ||||| | | | || |||||||| || |||||| |||||| | ||| Sbjct 865211 CTGAGCAATGAAGAAAGACATTATCCTATTGCCTATTCTATGGTGATCCATGGTGACATT 865152 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 || | ||||| | || | || | | ||| | ||||| || || |||||||| ||| Sbjct 865151 GAGATGTTTGAGAGACTTTTAAGATCAATTTATACTCCTCAAAATATTTACTGTGTGCAC 865092 Query 107811 GTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTC 107870 | |||||||| |||||||| |||| | |||| || | ||||| ||| ||||| Sbjct 865091 ATAGATGTGAAATCCCCAGACACTTATCATCAGGCTGTGCAAGCCATAGCTTCTTGCTTT 865032 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 ||| || || | || || ||| |||| || || || || ||||| |||| Sbjct 865031 GACAACGTGTTTGTTGCATCAAAACTGGAGTCGGTCGTATACGCTTCATGGTCACGAGTC 864972 Query 107931 CAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTA 107990 || ||||| |||||||||||||||||| || | | || | || ||||| ||| | Sbjct 864971 CAGGCTGATCTGAACTGTATGGAAGACCTGTTGAAAAGTACTGTAGAGTGGAAATACCTT 864912 Query 107991 CTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTC 108050 | ||||| || || ||||| ||||| ||||||||||||| || |||||| || | Sbjct 864911 ATCAATACCTGTGGAACAGATTTCCCTTTAAAGACCAATGCTGAAATGGTCACAACCTTA 864852 Query 108051 AAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaT 108110 ||| || || || || |||| |||||||||| ||| ||| |||||| Sbjct 864851 AAGTCATTAAATGGGAAAAACAACTTGGAGTCTGAAACACCACCTGCACATAAAAAACGA 864792 Query 108111 CGCTGGAAATACCGCTATGAGGTGACAG---ACACACTGTACCCTACCAGCAAGATGAAG 108167 | ||| |||||| |||||| || | || ||| | | | || | || ||| Sbjct 864791 AGATGGGAATACCACTATGAAGTTAAAGGTCACATAATAAAGACTGATGTTAGGA--AAG 864734 Query 108168 GACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227 ||| | |||| | ||| | || || ||||| || ||||| ||| | |||| | | || Sbjct 864733 AACCACCACCCTCA-AATATGCCGATTTTCACCGGCAATGCATATATAGTGGTCACCAGA 864675 Query 108228 GCCTTTGTCCAACATGTCTTAGACA-ACCCTAAATCCCAA-AGACTGGTT-GAATGGGTC 108284 | ||||| || ||| || || | | || ||| ||| ||| | || || |||| Sbjct 864674 GAATTTGTGAAATCTGTATTTGAAACAGCC---ATCGCAAGAGAATTTTTGGACTGGGCA 864618 Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATG 108344 || ||||| || || || || || |||||||| || ||||| | ||| | |||||| Sbjct 864617 AAGGACACATACAGTCCTGATGAGTTTCTCTGGGCTACACTTCACAGGGCTTCCTGGATG 864558 Query 108345 CCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGG 108404 ||||| ||| |||| | || || ||| ||| |||||||||| ||| | || ||| Sbjct 864557 CCTGGATCTCTTCCCAAGAACAGGAAATATGACACATCAGACATGATTGCGCTAGCAAGG 864498 Query 108405 CTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGC 108464 | || || ||| | | ||||| || | | || || |||||| | | ||| Sbjct 864497 TTGGTGAAATGGGGGAGTCTGGAGGGGGACACTAACCAAGGAGCCCCTTATTCTGCATGC 864438 Query 108465 TCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTC 108524 |||| | || | || | | || | || ||| | || || ||| ||||||| ||| Sbjct 864437 ACTGGGAAACACAGAAGAGATGTGTGTGTGTATGGGACTGGAGATCTGCACTGGATGCTC 864378 Query 108525 CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAG 108584 ||| | ||||| | || || || || |||||||| | ||| |||||| | | | | || Sbjct 864377 CAGCAGCATCATTTATTTGCCAATAAATTTGACCCAAAGGTTGATGATCATGCCATTCAA 864318 Query 108585 TGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGA 108624 || || || || | || | ||||| | |||||| || Sbjct 864317 TGTTTGGAGGAACATTTAAGATATAAGTCTCTCTATGAGA 864278 Score = 183 bits (202), Expect = 2e-41 Identities = 272/383 (71%), Gaps = 2/383 (1%) Strand=Plus/Minus Query 107689 CACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGA 107748 || |||| || |||||| || || |||||||||||||| |||||| |||| || |||| Sbjct 849580 CAATGAGCAAGGAAGAGGAAGCATTTCCCATTGCCTACTCTATGGTGATCCACGAAAAGA 849521 Query 107749 TTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCC 107808 |||||| ||||| ||||| | | | | ||||||||||| || || || ||||| | Sbjct 849520 TTGAAATGTTTGAGCGGCTTTTAAGGTCAATATATGCCCCTCAAAATATTTATTGTGTTC 849461 Query 107809 ACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGT-CAAGGCCATTATTTCCTGC 107867 | || |||| || || ||||||||||| |||||||| || | | || || | || || Sbjct 849460 ATGTAGATGCTAAATCTCCAGAGACTTTTAAAGAGGCCGTGCGAAGC-ATCGTCTCATGT 849402 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| ||||| || |||| |||| ||| ||||| ||||| || ||||| ||| Sbjct 849401 TTCAATAATGTTTTTGTGGCATCTAAGCTGGAAAGTGTGGTCTATGCTTCATGGTCGAGA 849342 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || || ||||| || ||||||||||| ||| | | | ||| | | ||||| ||| Sbjct 849341 GTCCAGGCTGATCTCAACTGTATGGAGGACCTTATAAAAAGCAGCATTCAGTGGAAATAC 849282 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 | | ||||| || || | |||||||| | ||||| ||||| || || || || Sbjct 849281 CTTTTAAATACCTGTGGAATGGACTTCCCGCTGAAGACTAATGCTGAAATTGTGAGAGCT 849222 Query 108048 CTCAAGATGTTGAAGGGTAAGAA 108070 || ||| | || || |||| ||| Sbjct 849221 CTGAAGTTATTAAATGGTAGGAA 849199 Score = 165 bits (182), Expect = 6e-36 Identities = 579/890 (65%), Gaps = 12/890 (1%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 ||| |||| || ||||| ||| || || ||||| || || ||||| | ||||| || Sbjct 787310 CCAATGAGCAAGGAAGAAGAAGATTTTCCTATTGCTTATTCAATGGTCATTCATGAAAAT 787251 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| ||||| | || || |||| | ||| ||||||||||| || || | Sbjct 787250 ATTGAGGCGTTTGAGAGACTCTTGAGAGCAATTTATTTTCCTCAGAACATCTATTGCATT 787191 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || || |||| ||||| ||| ||||| ||||| || || || || | || ||| Sbjct 787190 CATGTTGATGAAAAGTCTTCAGCACAGTTCAAGGAGGCAGTGAAAGCTATCACCTCATGC 787131 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 || ||||| || |||| ||| ||| | ||| | ||||| || ||||| ||| Sbjct 787130 TTTGATAATGTATTTGTGGCATCTAAACTGGAGCAAGTGATCTATGCTTCTTGGTCAAGA 787071 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || || ||||| || ||||| ||||||||| | | | || | | |||||||||| Sbjct 787070 GTCCAGGCTGATCTTAACTGCATGGAAGACCTATTAAAAAGTAACATTCAATGGAAGTAC 787011 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 | || |||||||| || |||||||||| | || || ||||| || || || | | Sbjct 787010 CTTCTAAATACATGTGGCTCAGACTTCCCACTGAAAACGAATGCTGAAATTGTGCGTGTT 786951 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaa 108107 || || | || || || |||| ||||| ||||| || || | ||| || Sbjct 786950 CTTAAATCACTTAATGGCAAAAACACAATGGAATCTGAAAGGCCATCACAACTGAAACAA 786891 Query 108108 aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAG 108167 | ||||||||||| | |||||| || | || ||| | | | | | | | |||| Sbjct 786890 AGACGCTGGAAATATCACTATGAAGTTAGTGA-TCACATTTCGCAAAC-GAATACTGAAA 786833 Query 108168 GA--CCCTCCCCCTGATAATTTACCC-ATGTTCACAGGGAATGCCTATTTTGTGGCCTCT 108224 | || || || ||| ||| ||||| ||||| ||||| || |||| | || Sbjct 786832 AAATGCCACCACC-GATTGCAAGCCCAATGTTTACAGGAAATGCTTACATTGTAGTGTCC 786774 Query 108225 CGAGCCTTTGTCCAACATGTCTTAG-ACAACCCTAAATCCCAAAGACTGGTTGAATGGGT 108283 ||| |||||| || |||| | | |||| | | | |||| | | || |||| Sbjct 786773 AGAGACTTTGTGAGGTATATCTTTGAAGAACCACAGGTTCAAAAG-TTTATCGATTGGGC 786715 Query 108284 CAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGG-A 108342 ||||||||| || || || || ||||| | |||| | | || | | | | ||| Sbjct 786714 CAAAGACACTTACAGTCCAGATGAACATATTTGGG-CTTCTTTGAACAGAATGCCTGGCG 786656 Query 108343 TGCCTGGCT-CTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCC 108401 | ||||||| || | |||| | ||||| | |||||||||| | | || || Sbjct 786655 TCCCTGGCTCCTCTCCCTA-CAGTGAAAAGTACGAACAATCAGACATGAATTCAATGGCT 786597 Query 108402 AGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCC 108461 || | || |||||| ||||| ||||| || | | | ||||| ||||| | || Sbjct 786596 AGAATGGTTAAGTGGTCATACCAAGAGGGTGACATAACTAAAGGGGCTGCTTATCCTCCT 786537 Query 108462 TGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATT 108521 || | ||| | || | ||||| | || || || || || || || || |||| | Sbjct 786536 TGTACCGGACTTCACAGAAGGGCAGTATGTATCTATGGTGCTGGAGATCTCAGCTGGTTA 786477 Query 108522 CTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGA 108571 | | | |||||||| || || ||||| |||||||| | ||| ||||| Sbjct 786476 ATTAAACAGCATCACCTGTTTGCCAACAAATTTGACCCAAAGGTAGATGA 786427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348161888879112