Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq13 105 5e-18 seq293 100 2e-16 >seq13 Length=4293860 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | ||| || || |||||||| || ||||| || || | || || | |||| Sbjct 4012957 AGGACAAGGTGCAGAGTAGATTCTTTCTGGATGTTATAATCTGACAAGGTACGGCCATCT 4013016 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| |||| |||||||| || || ||| | ||||| || || Sbjct 4013017 TCCAGCTGTTTTCCTGCAAAGATCAGTCTTTGCTGGTCTGGGGGAATACCTTCTTTGTCT 4013076 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | ||| || | | ||| ||||||| ||||| ||| | |||||| || Sbjct 4013077 TGAATCTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACTTCTAGGGTGATTGTT 4013136 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || ||||| ||||||||||| ||||||||| Sbjct 4013137 TTTCCAGTCAAGGTTTTTACAAAGATTTGCATT 4013169 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 ||||| ||||| ||||| ||||| || | | ||| | ||||||||||||||| || Sbjct 4014568 GTTGACTCTTTCTGAATATTGTAATCAGAAAGTGTACGGCCATCTTCCAATTGTTTTCCA 4014627 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| |||| | ||| || || || || | ||||| || || ||||| |||| Sbjct 4014628 GCAAAGATTAATCTCTGCTGGTCAGGTGGGATTCCTTCTTTGTCTTGAATTTTAGCCTTG 4014687 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | ||| ||||||| || ||| |||| |||||| | || || || | |||| Sbjct 4014688 ACATTTTCAATGGTGTCACTTGGTTCGACCTCAAGAGTGATGGTCTTCCCAGTAAGTGTT 4014747 Query 18309 TTTACAAAAATTTGCAT 18325 || ||||| |||||||| Sbjct 4014748 TTCACAAATATTTGCAT 4014764 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || || || || | || || || ||||| ||||||||||||||||| | Sbjct 4013854 CCTCCTCTCAGCCTGAGGACAAGATGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 4013913 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | ||||| || ||| | || || || || || || ||| Sbjct 4013914 AGGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGGGA 4013973 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || ||||| ||| || | | ||| ||||||| ||||| Sbjct 4013974 ATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACC 4014033 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | || || ||||||| ||||| ||||||||||| || |||||| Sbjct 4014034 TCCAGAGTAATTGTTTTGCCAGTCAAGGTTTTTACAAATATCTGCATT 4014081 >seq293 Length=1515377 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 90365 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 90306 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 90305 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 90246 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 90245 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 90187 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | ||||| || | ||||| || || || |||||||| Sbjct 90186 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATTTT 90150 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 90593 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 90534 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 90533 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 90474 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 90473 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 90415 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 90414 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 90381 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 90821 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 90762 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 90761 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 90702 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 90701 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 90643 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 90642 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 90609 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 91049 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 90990 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 90989 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 90930 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 90929 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 90871 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 90870 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 90837 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 91277 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 91218 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 91217 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 91158 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 91157 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 91099 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 91098 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 91065 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 91505 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 91446 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 91445 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 91386 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 91385 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 91327 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 91326 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 91293 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 91733 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 91674 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 91673 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 91614 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 91613 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 91555 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 91554 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 91521 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 91961 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 91902 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 91901 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 91842 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 91841 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 91783 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 91782 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 91749 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 92189 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 92130 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 92129 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 92070 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 92069 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 92011 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 92010 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 91977 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 92417 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 92358 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 92357 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 92298 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 92297 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 92239 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 92238 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 92205 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | |||||| || |||||||| || ||||||||||||| | ||| | ||| Sbjct 92645 AAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCATC 92586 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| ||| |||| | ||| || || || || | || || || || Sbjct 92585 TTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 92526 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| Sbjct 92525 TTGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGG 92467 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| || | ||||| || || || ||||| Sbjct 92466 TCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 92433 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | |||||| || |||||||| || ||||||||||| | | ||| | |||| Sbjct 420596 AGCACAAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCATCT 420537 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| |||||||| ||| |||| | || || || || || | || || || || Sbjct 420536 TCCAGCTGTTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCTTTGTCT 420477 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||| ||||| | ||| |||||||| |||||| |||| ||||||| | Sbjct 420476 TGGATCT-TTGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 420418 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | || || ||||| || ||||| Sbjct 420417 CTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 420385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379227549453060