Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 2e-11 >seq13 Length=4293860 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||||||||| |||||||| || |||||||| || || | || || || | || Sbjct 4014080 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAGT 4014021 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| |||||| | |||||||| | || |||||| Sbjct 4014020 GACACCATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAG 4013961 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT 24987 || | | |||| ||| || ||||| || |||||| Sbjct 4013960 CAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGAT 4013925 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| || |||||||| || || || || || | || || || | || Sbjct 4014536 ATGCAAATCTTTGTGAAGACCTTAACAGGAAAGACCATTACTCTGGAGGTTGAGCCCAGT 4014477 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | |||||||| ||||| | || || || | || || ||| Sbjct 4014476 GACACAATTGAGAATGTTAAGGCCAAAATCCAAGATAAGGAGGGTATCCCTCCAGATCAG 4014417 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | || | ||| |||||||| || |||||| | || || ||||||| | Sbjct 4014416 CAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGTACCCTGTCTGATTACAAC 4014357 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || |||||||| ||||||| ||||||||||| || || | || ||| Sbjct 4014356 ATCCAGAAAGAATCCACGCTGCATTTAGTGTTGCGTCTGAGGGGTGGT 4014309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418175589560960