Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 5e-12 >seq13 Length=4293860 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||| || || | ||||||||| || | |||||| | || ||||||||||| || ||||| Sbjct 4014573 CTCTTTCTGAATATTGTAATCAGAAAGTGTACGGCCATCTTCCAATTGTTTTCCAGCAAA 4014632 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 || |||| ||| || || | || | |||||||| || || | ||||| | Sbjct 4014633 GATTAATCTCTGCTGGTCAGGTGGGATTCCTTCTTTGTCTTGAATTTTAGCCTTGACATT 4014692 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| ||||| | | ||||| || | || || || || || || || |||||||| Sbjct 4014693 TTCAATGGTGTCACTTGGTTCGACCTCAAGAGTGATGGTCTTCCCAGTAAGTGTTTTCAC 4014752 Query 43098 AAAAATTTGCAT 43109 ||| |||||||| Sbjct 4014753 AAATATTTGCAT 4014764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381252527636904