Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 2e-12 >seq13 Length=4293860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| | ||| | || | ||| || || ||||| ||||| |||||||| || Sbjct 4013854 CCTCCTCTCAGCCTGAGGACAAGATGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 4013913 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || |||||| | ||||| || ||| | || |||||||| || || ||| Sbjct 4013914 AGGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGGGA 4013973 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| ||||| | ||| | || | || ||| Sbjct 4013974 ATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACC 4014033 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| ||||| |||||||| ||||| ||||| ||||| || |||||| Sbjct 4014034 TCCAGAGTAATTGTTTTGCCAGTCAAGGTTTTTACAAATATCTGCATT 4014081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| ||| | | ||||| || || || ||||| ||||| |||||||| || Sbjct 4014080 TTCCACCTCTTAAGCGAAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCTG 4014139 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | || | |||||| | ||||| || ||| | || |||||||| || || || Sbjct 4014140 AGAGGGTGCGACCATCTTCAAGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGG 4014199 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| |||||| ||||| | ||| | || | || ||| Sbjct 4014200 GAATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTCTCAATTGTGTCACTTGGCTCCA 4014259 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||| |||||||| || | || || |||||||| ||||| Sbjct 4014260 CCTCCAGAGTAATTGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 4014308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419458395645828