Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 >seq13 Length=4293860 Score = 127 bits (140), Expect = 2e-24 Identities = 159/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||||||||| || ||||||||| | |||||| | ||| | || ||| Sbjct 4013169 AATGCAAATCTTTGTAAAAACCTTGACTGGAAAAACAATCACCCTAGAAGTGGAGCCAAG 4013110 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | || || |||||| ||||||||||| || || || || || Sbjct 4013109 TGACACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCAGACCA 4013050 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTAT 26945 |||||||| || | | || ||||| || ||||||| | | | ||||| | ||| Sbjct 4013049 GCAAAGACTGATCTTTGCAGGAAAACAGCTGGAAGATGGCCGTACCTTGTCAG--ATTAT 4012992 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||| || |||||||||||| | || || |||||| Sbjct 4012991 AACATCCAGAAAGAATCTACTCTGCACCTTGTCCTG 4012956 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||||||||| || ||||| ||| | || || | || | || ||| Sbjct 4014081 AATGCAGATATTTGTAAAAACCTTGACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAG 4014022 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | || || || ||| ||||||||||| || || || || || Sbjct 4014021 TGACACCATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 4013962 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || || || | | ||| ||||| || ||||||| | | | || ||||| || Sbjct 4013961 GCAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGCCGCACCCTCTCAGACTACAA 4013902 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| ||||| || ||||||| ||||| || || |||||||| Sbjct 4013901 CATTCAAAAGGAATCCACCCTCCATCTTGTCCTCAGGCTGAGAGGAGG 4013854 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| ||| | || || | || | || ||| Sbjct 4013852 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAGT 4013793 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || || || ||| ||||||||||| || ||||| ||||| Sbjct 4013792 GACACAATTGAGAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 4013733 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| | ||| ||||| || ||||||| | | | | | || |||||| Sbjct 4013732 CAAAGATTGATTTTTGCCGGGAAACAGCTGGAAGATGGTCGCACCCTATCAGATTATAAC 4013673 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || |||||||| || | ||||| ||||| | || || || |||| Sbjct 4013672 ATCCAGAAAGAATCCACCTTGCATCTTGTCCTTCGTCTGAGGGGTGGAA 4013624 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| ||| | || || | || | || ||| Sbjct 4014308 ATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAGT 4014249 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || || || ||| ||||||||||| || || || || || Sbjct 4014248 GACACAATTGAGAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAG 4014189 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | ||| ||||| || ||||||| | | | | || ||||| ||| Sbjct 4014188 CAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGTCGCACCCTCTCAGACTACAAC 4014129 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| ||||| ||| |||| |||| || | | ||||| |||| Sbjct 4014128 ATCCAAAAGGAATCCACTCTCCACTTGGTTCTTCGCTTAAGAGGTGGAA 4014080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478511693143360