Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3383 118 3e-21 seq820 107 5e-18 >seq3383 Length=54064 Score = 118 bits (130), Expect = 3e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 ||||| || | |||| |||||||||||| || |||| || || || || || || ||| Sbjct 36509 GCACAACAGTTGTGGTATGCCATCATGGAATCTCAGACAGAAACTGGCACTCCTTACATG 36568 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 || |||||||| | || ||||||||| |||||||||| |||| || || || || Sbjct 36569 TTATACAAAGACGCCTGTAACCGCAAGAGCAACCAGCAGAACCTCGGCACCATAAAGTGC 36628 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||||||| ||||| |||||| | || |||||| | ||||||| Sbjct 36629 AGCAACCTGTGTACAGAGATTGTGGAGTACACCAGTGACGACGAG 36673 >seq820 Length=787271 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 12829 CCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGTTTTTACA 12888 |||||||||| | ||||| ||||||||||| | |||||| | ||||| | |||||| Sbjct 536884 CCAAATGTCAACGCGTCCATATCTTCAGTTGCAGCTGCATACACCTTTCCAGCTTTTACC 536943 Query 12889 TATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACCGGAATGCCCATTAGG 12948 | ||||||||||| ||||| ||||||||||| || | || ||||| ||||| ||| Sbjct 536944 AAAGCAGCACATGTGGCTTCTGCCTCACATGGGGCATCCACATATGGAATCCCCATCAGG 537003 Query 12949 GTTAGCATCTTTTT 12962 | ||||| ||| || Sbjct 537004 GATAGCAGCTTCTT 537017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302932980097016