Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13 143 2e-29 seq293 116 3e-21 >seq13 Length=4293860 Score = 143 bits (158), Expect = 2e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| || || || ||||| | ||||| || ||||| | | Sbjct 4014080 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAGT 4014021 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || |||||||||||||| || |||||||| || || || Sbjct 4014020 GACACCATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAG 4013961 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || ||||||||||| |||||| | || ||| ||||||| |||| || |||||| Sbjct 4013960 CAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGCCGCACCCTCTCAGACTACAAC 4013901 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 |||||||| ||||||||| | ||| Sbjct 4013900 ATTCAAAAGGAATCCACCCTCCAT 4013877 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || ||||| || || || | ||||| || || || ||| Sbjct 4013396 ATGCAAATCTTTGTGAAGACCTTAACAGGAAAGACCATTACTCTGGAGGTTGAGCCCAGT 4013337 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || ||||| || || ||||||||||| || || || || Sbjct 4013336 GATACCATCGAGAATGTTAAGGCCAAAATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 4013277 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || ||||||||||| |||||| | || ||| ||||||| |||| ||||| ||| Sbjct 4013276 CAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGCCGCACCCTCTCAGATTATAAC 4013217 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || |||||||||||| | ||| | ||| Sbjct 4013216 ATCCAGAAAGAATCCACCCTCCATCTTGTT 4013187 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || ||||| || || || | ||||| || || || ||| Sbjct 4014536 ATGCAAATCTTTGTGAAGACCTTAACAGGAAAGACCATTACTCTGGAGGTTGAGCCCAGT 4014477 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| ||||| ||||||||||| || || ||||| Sbjct 4014476 GACACAATTGAGAATGTTAAGGCCAAAATCCAAGATAAGGAGGGTATCCCTCCAGATCAG 4014417 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| ||| ||| | || ||||||||| Sbjct 4014416 CAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGTACCCTGTCTGATTACAAC 4014357 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||||||||| | |||||||| ||||| || | || ||| Sbjct 4014356 ATCCAGAAAGAATCCACGCTGCATTTAGTGTTGCGTCTGAGGGGTGGT 4014309 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || ||||| || || || | ||||| || || || ||| Sbjct 4013624 ATGCAAATCTTTGTGAAGACCTTAACAGGAAAGACCATTACTCTGGAGGTTGAGCCCAGT 4013565 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || ||||| || || ||||||||||| || || || || Sbjct 4013564 GATACCATCGAGAATGTTAAGGCCAAAATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 4013505 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| ||||||| |||| ||||| ||| Sbjct 4013504 CAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCAGATTATAAC 4013445 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||||||| | ||| Sbjct 4013444 ATCCAGAAAGAATCCACCTTGCAT 4013421 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| | || || || || |||||||||| || ||| | | Sbjct 4014764 ATGCAAATATTTGTGAAAACACTTACTGGGAAGACCATCACTCTTGAGGTCGAACCAAGT 4014705 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| |||||||||||||| || || || ||||| || || Sbjct 4014704 GACACCATTGAAAATGTCAAGGCTAAAATTCAAGACAAAGAAGGAATCCCACCTGACCAG 4014645 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| || || ||| ||| || | || |||||||| Sbjct 4014644 CAGAGATTAATCTTTGCTGGAAAACAATTGGAAGATGGCCGTACACTTTCTGATTACAAT 4014585 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| ||||| || ||| | || ||||||||||| Sbjct 4014584 ATTCAGAAAGAGTCAACCTTGCACTTAGTTTTGCG 4014550 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| || || || ||||| |||| || |||||||| | | Sbjct 4013168 ATGCAAATCTTTGTAAAAACCTTGACTGGAAAAACAATCACCCTAGAAGTGGAGCCAAGT 4013109 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || ||||||||||| || |||||||| || || || Sbjct 4013108 GACACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCAGACCAG 4013049 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || |||||| | || ||| ||| ||| | || ||||| ||| Sbjct 4013048 CAAAGACTGATCTTTGCAGGAAAACAGCTGGAAGATGGCCGTACCTTGTCAGATTATAAC 4012989 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || |||||||| || | || | || |||| ||| | || || ||| Sbjct 4012988 ATCCAGAAAGAATCTACTCTGCACCTTGTCCTGCGCTTGAGGGGTGGCTTT 4012938 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | || || ||||| | ||||| || ||||| | | Sbjct 4014308 ATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAGT 4014249 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || |||||||||||||| || |||||||| || || || Sbjct 4014248 GACACAATTGAGAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAG 4014189 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || ||||||||||| |||||| | || ||| |||||| |||| || |||||| Sbjct 4014188 CAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGTCGCACCCTCTCAGACTACAAC 4014129 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| |||||||| | || || ||| | || || Sbjct 4014128 ATCCAAAAGGAATCCACTCTCCACTTGGTTCTTCGCTT 4014091 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| ||||| || || | || || ||||| | ||||| || ||||| | | Sbjct 4013853 GATGCAAATATTTGTGAAGACCCTCACTGGCAAAACAATTACTCTGGAGGTGGAGCCAAG 4013794 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || |||||||||||||| || |||||||| || ||||| Sbjct 4013793 TGACACAATTGAGAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCA 4013734 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | | || |||||||| |||||| | || ||| |||||| | || ||||| || Sbjct 4013733 GCAAAGATTGATTTTTGCCGGGAAACAGCTGGAAGATGGTCGCACCCTATCAGATTATAA 4013674 Query 22398 CATTCAAAAAGAATCCACCATACAT 22422 ||| || |||||||||||| | ||| Sbjct 4013673 CATCCAGAAAGAATCCACCTTGCAT 4013649 >seq293 Length=1515377 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| |||| || || || | || || || |||||| | | Sbjct 419701 ATGCAGATCTTTGTGAAAACTCTAACTGGAAAGACCATTACCCTGGAGGTGGAAGCATCT 419760 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || ||||| || ||||| || ||||| || || Sbjct 419761 GACACTATTGACAATGTGAAATGTAAGATACAAGATAAAGAGGGCATCCCACCAGACCAG 419820 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | || ||| ||||||| | || || |||||| Sbjct 419821 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAC 419880 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||||||| | ||| Sbjct 419881 ATCCAGAAAGAATCCACCCTTCAT 419904 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 420157 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 420216 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || || ||||| |||||||| ||||| || || Sbjct 420217 GACACTATTGACAATGTGAAATGTAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAG 420276 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||||||||| ||| | || ||| ||||||| | || || |||||| Sbjct 420277 CAGCGATTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAC 420336 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||||||| | ||| Sbjct 420337 ATCCAGAAAGAATCCACCCTTCAT 420360 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || || |||| ||||| || || ||| Sbjct 92661 ATGCAGATCTTCGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 92720 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| ||| || |||||||| |||||||| ||||| || || Sbjct 92721 GACACTATTGAGAATGTCAAAGCAAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 92780 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | |||||||| ||||| ||| | || || ||||||| | || || |||||| Sbjct 92781 CAGAGATTGATATTTGCTGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCTGACTACAAC 92840 Query 22399 ATTCAAAAAGAATCCACC 22416 || || |||||||||||| Sbjct 92841 ATCCAGAAAGAATCCACC 92858 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 419929 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 419988 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || ||||| || ||||| || ||||| || || Sbjct 419989 GACACTATTGACAATGTGAAATGTAAGATACAAGATAAAGAGGGCATCCCACCAGACCAG 420048 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | || ||| ||||||| | || || |||||| Sbjct 420049 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAC 420108 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || |||||||||||| | ||| Sbjct 420109 ATCCAGAAAGAATCCACCCTTCAT 420132 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || || |||| ||||| || || || Sbjct 420613 ATGCAGATCTTCGTGAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTTGAGTGCAGT 420672 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || || ||||| |||||||| ||||| || || Sbjct 420673 GACACTATTGACAATGTGAAATGTAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAG 420732 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||| ||| | || ||| |||||| | || || |||||| Sbjct 420733 CAGAGATTGATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACACTTTCTGACTACAAC 420792 Query 22399 ATTCAAAAAGAATCCACC 22416 || || |||||||||||| Sbjct 420793 ATCCAGAAAGAATCCACC 420810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419599152423220