Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq13 161 2e-34 seq293 134 3e-26 >seq13 Length=4293860 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| || ||||||||||| || || ||||| || | |||||||| Sbjct 4014100 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCTGAGAGGGTGCGACCATCTTCA 4014159 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || ||||| ||||| || || || ||||| || ||||| ||||| ||||||||| Sbjct 4014160 AGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGA 4014219 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||| || ||| || ||||| || || || |||| || || ||||| Sbjct 4014220 ATTTTGGCCTTCACATTCTCAATTGTGTCACTTGGCTCCACCTCCAGAGTAATTGTTTTG 4014279 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || || |||||||| Sbjct 4014280 CCAGTGAGGGTCTTCACAAAAATCTGCAT 4014308 Score = 152 bits (168), Expect = 9e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305 ||||| || | ||| || || || ||||| |||||||||||||| || | || | || Sbjct 4012953 GCGCAGGACAAGGTGCAGAGTAGATTCTTTCTGGATGTTATAATCTGACAAGGTACGGCC 4013012 Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365 |||||| | ||| || || || || || |||||||| ||||| || ||||| ||||| || Sbjct 4013013 ATCTTCCAGCTGTTTTCCTGCAAAGATCAGTCTTTGCTGGTCTGGGGGAATACCTTCTTT 4013072 Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425 |||||||||||| ||||| || || |||||||| || || ||||| | |||||| Sbjct 4013073 GTCTTGAATCTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACTTCTAGGGTGAT 4013132 Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||||| || | ||| || || || || |||||| Sbjct 4013133 TGTTTTTCCAGTCAAGGTTTTTACAAAGATTTGCATT 4013169 Score = 152 bits (168), Expect = 9e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| ||||| |||||||||||||| || || || | |||||||| | ||| |||||| Sbjct 4013656 GTGGATTCTTTCTGGATGTTATAATCTGATAGGGTGCGACCATCTTCCAGCTGTTTCCCG 4013715 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || | |||||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 4013716 GCAAAAATCAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCCTTC 4013775 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || ||| || ||||| || || || |||| || || ||||| || ||||||||| Sbjct 4013776 ACATTCTCAATTGTGTCACTTGGCTCCACCTCCAGAGTAATTGTTTTGCCAGTGAGGGTC 4013835 Query 68445 TTGACGAATATCTGCAT 68461 || || ||||| ||||| Sbjct 4013836 TTCACAAATATTTGCAT 4013852 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | ||| ||||| || ||||| | || |||||||| || || || ||||| | Sbjct 4014536 TTCCACCTCTAAGACGCAAAACTAAGTGCAAGGTTGACTCTTTCTGAATATTGTAATCAG 4014595 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | ||||| | |||||||| || || || || || || || | ||| || ||||| |||| Sbjct 4014596 AAAGTGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTCTGCTGGTCAGGTG 4014655 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||| ||||||||||| || |||||||| || |||||||| || ||| | Sbjct 4014656 GGATTCCTTCTTTGTCTTGAATTTTAGCCTTGACATTTTCAATGGTGTCACTTGGTTCGA 4014715 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||||| || || || || || || || ||||| ||||| Sbjct 4014716 CCTCAAGAGTGATGGTCTTCCCAGTAAGTGTTTTCACAAATATTTGCAT 4014764 Score = 140 bits (154), Expect = 6e-28 Identities = 157/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| || ||||| ||||| || || ||||| || | |||||||| | Sbjct 4013873 CAAGATGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCAA 4013932 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||| || ||||| ||||| || || || ||||| || ||||| ||||| |||||||||| Sbjct 4013933 GCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAA 4013992 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || ||||| || || |||||||| || || || |||| || || ||||| | Sbjct 4013993 TTTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACCTCCAGAGTAATTGTTTTGC 4014052 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | ||| || || |||||||||||| Sbjct 4014053 CAGTCAAGGTTTTTACAAATATCTGCATT 4014081 Score = 134 bits (148), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| ||||| |||||||||||||| ||||| || | |||||||| | Sbjct 4013189 CAAGATGGAGGGTGGATTCTTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAA 4013248 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||| || ||||| ||||| || || || ||||| || || || || ||||| || || | Sbjct 4013249 GCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGA 4013308 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || ||||| || ||||||||| || | || || |||| || ||||| |||| Sbjct 4013309 TTTTGGCCTTAACATTCTCGATGGTATCACTGGGCTCAACCTCCAGAGTAATGGTCTTTC 4013368 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | |||||| || || || |||||| Sbjct 4013369 CTGTTAAGGTCTTCACAAAGATTTGCATT 4013397 Score = 123 bits (136), Expect = 5e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| ||||| |||||||||||||| ||||| || | |||||||| | ||| || || Sbjct 4013428 GTGGATTCTTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCA 4013487 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || || || || ||||| || || || || ||||| || || || || ||||| Sbjct 4013488 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGATTTTGGCCTTA 4013547 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || ||||||||| || | || || |||| || ||||| ||||| || | |||| Sbjct 4013548 ACATTCTCGATGGTATCACTGGGCTCAACCTCCAGAGTAATGGTCTTTCCTGTTAAGGTC 4013607 Query 68445 TTGACGAATATCTGCATT 68462 || || || || |||||| Sbjct 4013608 TTCACAAAGATTTGCATT 4013625 >seq293 Length=1515377 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || ||||| |||||||| || || || ||||| | |||||||| | ||| Sbjct 420588 GTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCATCTTCCAGCTG 420529 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 || || || || || | || || ||||| ||||| || || || |||||||| ||||| Sbjct 420528 TTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTT 420469 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||| ||||| ||| || ||||| | || || || | ||||||||| || || || Sbjct 420468 TGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGT 420409 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 ||||||||| || || |||||||| Sbjct 420408 GAGGGTCTTCACAAAGATCTGCAT 420385 Score = 123 bits (136), Expect = 5e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| ||||| |||||||| || || || || || | |||||||| | Sbjct 420136 CAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCA 420077 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||| || ||||| ||||| ||||| || || ||||| | Sbjct 420076 GCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGTA 420017 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| || || || || ||||| | || || || | ||||||||| || | Sbjct 420016 TCTTACATTTCACATTGTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 419957 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||||| || || |||||||| Sbjct 419956 CTGTGAGGGTCTTCACAAAGATCTGCAT 419929 Score = 114 bits (126), Expect = 2e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| ||||| |||||||| || || || || || | |||||||| | Sbjct 420364 CAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCA 420305 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | || || ||||| ||||| || || || ||||| || | Sbjct 420304 GCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGGA 420245 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| || || || || ||||| | || || || | ||||||||| || | Sbjct 420244 TCTTACATTTCACATTGTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 420185 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||||| || || |||||||| Sbjct 420184 CTGTGAGGGTCTTCACAAAGATCTGCAT 420157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921332227187360