Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 9e-15 seq293 86.0 4e-12 >seq13 Length=4293860 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || || ||||| || || |||||||| |||| || || Sbjct 4014537 AATGCAAATCTTTGTGAAGACCTTAACAGGAAAGACCATTACTCTGGAGGTTGAGCCCAG 4014478 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||||| ||||| |||||| | ||| | | || Sbjct 4014477 TGACACAATTGAGAATGTTAAGGCCAAAATCCAAGATAAGGAGGGTATCCCTCCAGATCA 4014418 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || ||||||||||||||||| || |||||| || || | |||||||| Sbjct 4014417 GCAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGTACCCTGTCTGATTACAA 4014358 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGT 22049 || ||||| ||||| || || ||| | || || ||| Sbjct 4014357 CATCCAGAAAGAATCCACGCTGCATTTAGTGTTGCGT 4014321 >seq293 Length=1515377 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| |||| || || ||||||||| |||| |||||| | Sbjct 419701 ATGCAGATCTTTGTGAAAACTCTAACTGGAAAGACCATTACCCTGGAGGTGGAAGCATCT 419760 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || || || ||||||||||| | || | |||| Sbjct 419761 GACACTATTGACAATGTGAAATGTAAGATACAAGATAAAGAGGGCATCCCACCAGACCAG 419820 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | |||||||| ||||| || || |||||| || | | || ||||| Sbjct 419821 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAC 419880 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| || |||||| | ||| | ||| | |||| || Sbjct 419881 ATCCAGAAAGAATCCACCCTTCATCTTGTACTCCGTCTGAGAGGTGG 419927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358014863296552