Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 7e-15 seq425 93.3 8e-14 seq3383 91.5 3e-13 >seq16 Length=4132212 Score = 96.9 bits (106), Expect = 7e-15 Identities = 99/127 (78%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || ||| |||| || || || |||||||| || ||| |||| || | | |||| Sbjct 2457965 TGGTGGCGTTTGCCGCGGTAGAAGGAATCTTCTTTTCTGGCTCCTTTGCTGCTGTTTTCT 2457906 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 || | ||| ||| |||| | ||||||||| ||||||||||| || || ||||||||| | Sbjct 2457905 GGTTGAAGAAGAGAGGTCT-GATGCCCGGTCTCACCTTCTCCAATGAGCTCATCAGCCGA 2457847 Query 42825 GACGAGG 42831 ||||||| Sbjct 2457846 GACGAGG 2457840 >seq425 Length=1236905 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || ||| | || || ||||| ||||| ||||| || | || || ||||||||| Sbjct 157536 TGGTTGCATTTGCTGCTGTGGAGGGAATCTTTTTCTCTGGATCATTTGCAGCCATCTTCT 157477 Query 42766 GGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||| ||| || | || |||||| || ||||| ||||| || ||||| |||||||| | Sbjct 157476 GGCTGAAGAAGCGAGGGTTGATGCCTGGTCTCACATTCTCTAATGAACTAATCAGCAGAG 157417 Query 42826 ACGAGG 42831 | |||| Sbjct 157416 ATGAGG 157411 >seq3383 Length=54064 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||||||||| || ||||| || | ||| ||||| ||||||| || ||||| || Sbjct 41275 ACCTGAAACTCCCCGGACAGGACTCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCAATA 41216 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 || |||| ||||| ||||| || ||| |||||| ||||| || | ||||||| | Sbjct 41215 GATTCATTGTTCCCCAGGATCTGTGCGGTGGACGCAGTGGGCATCGGAGCGACCAGCAAA 41156 Query 244217 CTGTTCCTCACGCCGTGCCT 244236 |||||||| | || ||||| Sbjct 41155 CTGTTCCTAATACCATGCCT 41136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944041874802880