Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq13 102 9e-17 seq356 96.9 4e-15 seq293 96.9 4e-15 seq99 95.1 1e-14 seq4664 89.7 6e-13 seq2600 89.7 6e-13 seq4712 86.0 7e-12 seq4202 86.0 7e-12 seq3012 86.0 7e-12 seq661 86.0 7e-12 seq132 86.0 7e-12 seq263 84.2 2e-11 seq144 82.4 8e-11 >seq13 Length=4293860 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||||||||| ||||||| ||| || || || || |||||||||| Sbjct 4014309 ACCACCCCTCAGACGCAACACTAAATGCAGCGTGGATTCTTTCTGGATGTTGTAATCAGA 4014368 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || | || || ||||| || ||||| || || || | |||||| || | || Sbjct 4014369 CAGGGTACGGCCATCTTCAAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGG 4014428 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||| || |||||| || | || | | ||||| || | || || Sbjct 4014429 GATACCCTCCTTATCTTGGATTTTGGCCTTAACATTCTCAATTGTGTCACTGGGCTCAAC 4014488 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || ||||| || || |||| ||||| ||||||||||||||| Sbjct 4014489 CTCCAGAGTAATGGTCTTTCCTGTTAAGGTCTTCACAAAGATTTGCATT 4014537 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | |||||| || || ||||| || ||| || |||||||||||||||| Sbjct 4014538 CCACCTCTAAGACGCAAAACTAAGTGCAAGGTTGACTCTTTCTGAATATTGTAATCAGAA 4014597 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | || || ||||| || || | || ||||||||| | ||| Sbjct 4014598 AGTGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTCTGCTGGTCAGGTGGG 4014657 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| |||| | |||| | | | ||||| || | ||| || Sbjct 4014658 ATTCCTTCTTTGT-CTTGAATTTTAGCCTTGACATTTTCAATGGTGTCACTTGGTTCGAC 4014716 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || || || || || || ||||| |||||||| Sbjct 4014717 CTCAAGAGTGATGGTCTTCCCAGTAAGTGTTTTCACAAATATTTGCAT 4014764 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4023419 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4023478 Query 57067 TACTACCGAGGATTG 57081 ||||| ||||||||| Sbjct 4023479 TACTAACGAGGATTG 4023493 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| ||| | || | ||| | ||| || || || || || ||||| | Sbjct 4013170 CCACCTCTTAGACGGAGAACAAGATGGAGGGTGGATTCTTTCTGGATGTTATAATCTGAG 4013229 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| ||||| || ||||| || | ||||||||| | || Sbjct 4013230 AGGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCAGGAGGG 4013289 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||| ||| |||||| || | || | | || || || | || || Sbjct 4013290 ATACCCTCCTTATCCTGGATTTTGGCCTTAACATTCTCGATGGTATCACTGGGCTCAACC 4013349 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || ||||| || || |||| ||||| ||||||||||||||| Sbjct 4013350 TCCAGAGTAATGGTCTTTCCTGTTAAGGTCTTCACAAAGATTTGCATT 4013397 >seq356 Length=1361660 Score = 96.9 bits (106), Expect = 4e-15 Identities = 157/226 (69%), Gaps = 5/226 (2%) Strand=Plus/Minus Query 41997 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 42056 |||||||||||||| || |||||| || |||||||| || | ||| || | | || Sbjct 965273 AACACCAAATGCAAGGTTGACTCCTTCTGGATATTGTAGTCTGACAGCGTACATCCATCT 965214 Query 42057 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 || || || || ||||| || || || | ||||||||| | || | | ||| ||||| Sbjct 965213 TCAAGGTGTTTGCCAGCAAAGATCAGACCCTGCTGGTCAGGAGGAATACCTTCCCTGTCC 965154 Query 42117 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA-----TCGACCGTGA 42171 |||||| | || | | | | | ||||||| | ||| ||| || | ||||| Sbjct 965153 TGGATTTTGTCCTTAACATTTTCGATCATGTCGCTGGGTTCAACACAACCTCTAGCGTGA 965094 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCACGCC 42217 | ||||| || || || || ||||| ||||| ||||| || |||| Sbjct 965093 TTGTTTTCCCAGTAAGGGTTTTTACGAAGATCTGCATGTTGGCGCC 965048 >seq293 Length=1515377 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || ||||| |||| || || || | || || ||||| || ||||| || Sbjct 420575 TCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAG 420516 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||||||| | ||| | | ||| ||||| ||| ||| ||||| || Sbjct 420515 ATCAATCGCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTTGCTTTGACATTC 420456 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || | || || || | |||||||| ||||| || || ||||| ||| Sbjct 420455 TCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACA 420396 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 420395 AAGATCTGCAT 420385 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || | ||| | ||| || || || || ||||| |||| Sbjct 420384 ACCACCTCTCAGACGGAGTACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGA 420325 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| || || || || | |||||||||||| | ||| Sbjct 420324 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGTGG 420265 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| |||||| ||| || ||| | | | | ||||| || | || || Sbjct 420264 GATACCCTCTTTGTCCTGGATCTTACATTTCACATTGTCAATAGTGTCACTGGGCTCAAC 420205 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 420204 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 420157 >seq99 Length=2470598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| || |||| || | | |||||||||| ||||||||||||||||||||| || Sbjct 1059702 AAAAATATTACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 1059643 Query 57056 ACTCACCACTATACTACCGAGGATTG 57081 ||| |||||||||||| ||||||||| Sbjct 1059642 ACTTACCACTATACTAACGAGGATTG 1059617 Score = 93.3 bits (102), Expect = 5e-14 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 56998 AAAAATTTT---CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 |||||||| |||| || | | |||||||||| ||||||||||||||||||||| | Sbjct 1810473 AAAAATTTGAGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1810532 Query 57055 TACTCACCACTATACTACCGAGGATTG 57081 |||| |||||||||||| ||||||||| Sbjct 1810533 TACTTACCACTATACTAACGAGGATTG 1810559 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1065063 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1065122 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1065123 TACTAACGAGGA 1065134 >seq4664 Length=11476 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 11131 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 11072 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 11071 TACTAACGAGGA 11060 >seq2600 Length=152120 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 24661 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24602 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 24601 TACTAACGAGGA 24590 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 9299 CTCCCCGTCGCGGAATCGAACCCCTGTCTCCCGCGTGACAGGCGGAGATACTCACCACTA 9358 Query 57067 TACTACCGAGGA 57078 ||||| ||| || Sbjct 9359 TACTAACGAAGA 9370 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| |||||||| |||||||||||| |||||||||||||||||| |||||| Sbjct 25579 AATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTCACCACTATACTAACGAGGA 25521 >seq4712 Length=10851 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4961 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4902 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 4901 TACTAACGAGGA 4890 >seq4202 Length=20294 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 14802 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 14743 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 14742 TACTAACGAGGA 14731 >seq3012 Length=81564 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 46089 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 46030 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 46029 TACTAACGAGGA 46018 >seq661 Length=996409 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 943072 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 943013 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 943012 TACTAACGAGGA 943001 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 945537 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 945478 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 945477 TACTAACGAGGAGTG 945463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||| Sbjct 945892 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTAACGAGGA 945834 >seq132 Length=2215019 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1774901 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1774960 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1774961 TACTAACGAGGA 1774972 >seq263 Length=1605742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct 1372290 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATAATAACGAGGA 1372232 >seq144 Length=2685054 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGG 57077 |||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||| Sbjct 1060707 AATCGAACCCCGGTCTCCCGCGTGACAGGCAGGGATACTCACCACTATACTAACGAGG 1060764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543041769449920