Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq293 96.9 2e-15 seq13 95.1 9e-15 >seq293 Length=1515377 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| ||||| || |||||||| || || | | | ||||| | ||| Sbjct 420587 TGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCATCTTCCAGCTGT 420528 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 |||||||| | ||||| ||||| ||||| ||| || || || ||||| || ||| Sbjct 420527 TTGCCAGCAAAGATCAATCGCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTT 420468 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| ||| | || ||||| || || || || || | ||| ||||| || ||||| Sbjct 420467 GC-TTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGT 420409 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||| Sbjct 420408 GAGGGTCTTCACAAAGATCTGCATA 420384 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 90379 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 90320 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 90319 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 90260 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 90259 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 90201 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | ||| ||||| || ||||| || ||||| || || || ||||| || Sbjct 90200 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATTTT 90150 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 90607 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 90548 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 90547 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 90488 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 90487 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 90429 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 90428 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 90380 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 90835 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 90776 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 90775 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 90716 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 90715 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 90657 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 90656 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 90608 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 91063 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 91004 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 91003 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 90944 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 90943 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 90885 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 90884 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 90836 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 91291 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 91232 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 91231 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 91172 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 91171 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 91113 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 91112 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 91064 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 91519 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 91460 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 91459 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 91400 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 91399 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 91341 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 91340 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 91292 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 91747 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 91688 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 91687 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 91628 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 91627 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 91569 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 91568 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 91520 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 91975 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 91916 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 91915 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 91856 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 91855 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 91797 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 91796 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 91748 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 92203 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 92144 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 92143 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 92084 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 92083 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 92025 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 92024 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 91976 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 92431 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 92372 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 92371 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 92312 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 92311 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 92253 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 92252 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 92204 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||||||||||| ||||| || |||||||| ||| Sbjct 92659 CCACCTCTCAAACGAAGCACGAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAA 92600 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || |||||||| | ||||| | ||| ||||| ||| Sbjct 92599 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGTGGG 92540 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| || ||||| ||| ||| | || ||||| || || || || Sbjct 92539 ATACCCTCTTTGTCTTGGATCTTTGC-TTTGACATTCTCAATAGTGTCACTGGGCTCAAC 92481 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 92480 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATA 92432 >seq13 Length=4293860 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || || | || | ||| ||||| || || ||||| |||||||| || | Sbjct 4013854 CCTCCTCTCAGCCTGAGGACAAGATGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 4013913 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||||| || || |||||| | ||| ||||| ||| Sbjct 4013914 AGGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAATATCAGCCTCTGCTGGTCTGGGGGA 4013973 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||||| || ||| |||| || || || || || || Sbjct 4013974 ATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACC 4014033 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| ||||| || |||| ||||||||||| || ||||| Sbjct 4014034 TCCAGAGTAATTGTTTTGCCAGTCAAGGTTTTTACAAATATCTGCAT 4014080 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 || || ||||| ||||| || ||||| ||||| ||| || || | ||||| | | Sbjct 4012966 TGCAGAGTAGATTCTTTCTGGATGTTATAATC--TGACAAGGTACGGCCATCTTCCAGCT 4013023 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 |||| || || | |||| | || ||||| ||||| ||||| ||||| ||| | Sbjct 4013024 GTTTTCCTGCAAAGATCAGTCTTTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAATCT 4013083 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 || || ||| |||| || || || || || || |||| ||| || ||||| || | Sbjct 4013084 TGGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACTTCTAGGGTGATTGTTTTTCCAG 4013143 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||||||||||| |||||||| Sbjct 4013144 TCAAGGTTTTTACAAAGATTTGCAT 4013168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357282288250580