Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 >seq13 Length=4293860 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || | || ||| || || | |||||| ||| |||||| || || |||||||| | Sbjct 4013626 CCACCCCTCAGACGAAGGACAAGATGCAAGGTGGATTCTTTCTGGATGTTATAATCTGAT 4013685 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| |||| |||| ||||||||| ||||||| || | |||||||| | || Sbjct 4013686 AGGGTGCGACCATCTTCCAGCTGTTTCCCGGCAAAAATCAATCTTTGCTGATCTGGAGGA 4013745 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCA 39670 | ||||||||||| ||||| || | || | | ||||| || || |||| Sbjct 4013746 ATACCTTCTTTGTCTTGAATTTTGGCCTTCACATTCTCAATTGTGTCACTTGGC--TCCA 4013803 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||| |||||||||||| || || | || || || || || ||||| Sbjct 4013804 CCTCCAGAGTAATTGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCAT 4013852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347262964914404