Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq309 118 2e-21 seq3383 98.7 2e-15 seq16 98.7 2e-15 seq2603 93.3 8e-14 >seq309 Length=1444205 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 241423 CTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTT 241482 ||||||||| || || ||||| |||||||| | | || || | ||| | | ||| Sbjct 1189695 CTGTTTGAGCTGCGCGACCTGCTCCCGCAGCATGTTGGCCGTGGACGCCAGCTCAGAGTT 1189754 Query 241483 GTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCG 241542 | ||||| || ||| ||||| ||||||||||| |||||||| |||||||| | | Sbjct 1189755 CTGCGACTTCAGGTTCTTGACTTTGTCCTCCAGCCGGGCGATGCGCTCCAGTTTTCTCTT 1189814 Query 241543 GCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTC 241602 ||||| |||| ||| || | |||||||| | | || || || || |||||||| || Sbjct 1189815 CCGGCACTTGGAGGCGGCGATCCGGTTCCGCATGCGTTTGCGCTCGGCTTTGATGCGCTC 1189874 Query 241603 CTGGTCCTCCATGTCGATCGGAGACTTGGG 241632 ||| |||||||| ||| || ||| |||| Sbjct 1189875 CTGCGACTCCATGTTGATGGGGGACATGGG 1189904 >seq3383 Length=54064 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||||||| || || || |||||||| | | ||||| || |||||||||||||||| Sbjct 38938 CCTTTGCTGACAGGACTCCCCTGGTACGTGTCATAGGGACCGAGCTCCTTGGCCAGCTCA 38879 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| | || ||| |||||||| |||||||| ||||| |||| | |||| ||| | Sbjct 38878 CAGCTGGACTCCAGAGCAGCGTAATAGATGGTCTCAAAAATCTGCTTGTTCAGCAATTGA 38819 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 || ||||| | ||| || | |||| | ||| | || || || |||||||| Sbjct 38818 GCTTCTGGACTCTCGAATGGGTACCGCATGAGGATGAAGGCGTCTGCAAGGCCCTGGACT 38759 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGA 213352 || || || || || | ||| ||| ||| || Sbjct 38758 CCAATTCCAATAGGACGGTGCCTCTTGTTGGA 38727 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| |||||||| ||||| | | |||||||||||||| | ||||| Sbjct 43291 GTTGAGCGACTGGCTCTGGTCAATGAAGGCTCCTCTGTCAGCGGCCATCTTGATGATGGT 43232 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGA 212808 | |||| |||| ||||||||||||||| ||| ||| || ||||| | |||| Sbjct 43231 TTTCTGAGAGATCTCCCACACGGTCTTATAGAGTTCCTTCAGGTCAGCCGGGA 43179 >seq16 Length=4132212 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| |||||||||||| | ||||||||| |||||| ||||| | || |||| || Sbjct 2457842 TCGTCTCGGCTGATGAGCTCATTGGAGAAGGTGAGACCGGGCATCAGACCTCTCTTCTTC 2457901 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 | |||||||| || || || |||||||| |||||||| || || || || || ||||| Sbjct 2457902 AACCAGAAAACAGCAGCAAAGGAGCCAGAAAAGAAGATTCCTTCTACCGCGGCAAACGC 2457960 >seq2603 Length=129103 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 241501 CACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGC 241560 ||| || |||||||| || |||||||||||||| ||||| ||||| |||||||| || Sbjct 30291 CACCTTGTCCTCCAGGCGGGCGATGCGTTCCAGCTTGCGTTTCCGGCACTTGGTGGCAGC 30232 Query 241561 CAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGAT 241620 || |||||||| | | ||| || ||| | ||||| ||||| || ||||||| ||| Sbjct 30231 CAGCCGGTTCCGCAAACGCTTCCGCTCCACTTTGATCTTCTCCTGCTCTTCCATGTTGAT 30172 Query 241621 CGGAGA 241626 || || Sbjct 30171 GGGGGA 30166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931239506897920