Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq13 100 2e-16 >seq13 Length=4293860 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||||||||| || || || ||||| || ||| ||| ||| || Sbjct 4013169 AATGCAAATCTTTGTAAAAACCTTGACTGGAAAAACAATCACCCTAGAAGTGGAGCCAAG 4013110 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || || |||||||| || | ||| ||| || Sbjct 4013109 TGACACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCAGACCA 4013050 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || ||||| |||||||| || ||||| |||||||| || || | |||||||| Sbjct 4013049 GCAAAGACTGATCTTTGCAGGAAAACAGCTGGAAGATGGCCGTACCTTGTCAGATTATAA 4012990 Query 28733 CATTCAAAAAGAATCTACTCTGCAC 28757 ||| || |||||||||||||||||| Sbjct 4012989 CATCCAGAAAGAATCTACTCTGCAC 4012965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425274209766252