Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq328 120 4e-22 >seq328 Length=1403823 Score = 120 bits (132), Expect = 4e-22 Identities = 606/946 (64%), Gaps = 41/946 (4%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||||| | ||||| ||||| ||||| | || | ||| || || | || |||| Sbjct 460267 TGTGTCTTAAATGTTGTTCCAGGCATTGAATAGCAGAGGGGTCCACATCAACATCAAATT 460326 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 | ||||| |||| ||||| ||| | || | |||| ||| || | ||||| | Sbjct 460327 TGTTTGCAAACAAGTGGTGCTGCTTCAACATGAAC---TGCAAGTCCCCAGCACCGAAGA 460383 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | || | || || || || || |||| || || || | || || || || || | Sbjct 460384 CACAAATTGAGCGGATATGGGTCCCACTGCATGGAGGATATGGGGCACCCTTGGCGACAT 460443 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||| | || ||||| |||||||| |||||||| | | ||| ||||| || | Sbjct 460444 CTCCTTCCCAATATTGCCATTTCACAAATCTGGCTATGGAATTCATATCGGATACATCAT 460503 Query 160285 ATTTGTAC-ATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCA 160342 |||| || || | |||||| | || || ||| | | || | | |||||| ||||| Sbjct 460504 ATTT--ACTATTTGCGGGAACCGAGCCAGGCACGTCTGAAATTCTATTTAGGGTAGCCCA 460561 Query 160343 CAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAA--CTCTCCGATTAAC 160400 || ||| || ||||| || || |||||||||||||| | || ||| ||| | Sbjct 460562 CAAAAATTCATCTGGGCTATAGGTATCCTTAGACCATTCAAGCAATGTTCTTGCATTGTC 460621 Query 160401 CTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAG 160460 | | | || |||||| ||| | | || | || | ||||| || ||||| || Sbjct 460622 ATTTTC--CAAAACGTGCCCAACAAATGCCCTACTGACAATGAAGTAGGCACTGCCAGAA 460679 Query 160461 AATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGG--TGTTAGACACCACTC 160518 |||| | || | | ||| || | ||||| || | | | || | |||| | Sbjct 460680 AATACTTGAATTTGAAAAGGTGGAGGTTCTTTATCAATATTTGTTTTTTGAATACCA--C 460737 Query 160519 CTTTCACCAGCGC---GTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTT 160575 | || | | | |||| || |||||||||| |||| | ||||| || Sbjct 460738 CGTTTGCTATTTCAAAGTGT---TTTTTCCACCTGAATTCTTTGTTCCCAGGCATCTTTT 460794 Query 160576 CCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTG-ACGATCTCTAGGTTC 160634 | | || |||||||| | || | | | ||||||| |||| || || || ||| Sbjct 460795 CACTTTCAAGACTGTTCTCTCCCTTTAATGCTTTCAGC-ACTTGCACTATTTCCCTGTTG 460853 Query 160635 GTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCGCTC 160691 ||||| | || ||||| |||| || | ||||| | ||||||||| | | || | Sbjct 460854 GTCTTCATTGGGAAGTCCATACCACAAAGATTTATTAAGTACTTCCACCGTGTATTGC-C 460912 Query 160692 AGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTAC 160751 | || | || ||| ||||||| || | || ||||| || || |||| || || || Sbjct 460913 A--TCATACAAGTCTTTCATGCAGTTTAGGTCAGCCTGAACTCGAGTCCATGATGCATAT 460970 Query 160752 ACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---C 160808 || || |||||||||| || | || || || || ||||| || | ||| | | Sbjct 460971 ACCACATTCTCTAGTTGGGACGCAATGAAAACATTTTCAAAACAAGAGGCAATTGCTTTC 461030 Query 160809 ACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTC 160868 || | |||| |||| | ||| | | ||| || | ||| | ||| || |||| Sbjct 461031 ACTGCGGCCATAAAGGA-TTCTGA--AGATTTTTTATCAAAGTGGATGCAGTAGTAGTTC 461087 Query 160869 TGAGGCGCGTAGATGGCCCTGAGCAA---CCTCTCGAACATCTCTATCTTATGATGGATC 160925 |||||| || ||| ||| | || || || | ||| || || ||||| || | | Sbjct 461088 TGAGGCATATAAATG---CTGCGTAAAAGTCTTTCCAGCATGTCAATTTTATGGTGAACC 461144 Query 160926 ACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAGGG 160971 || || || |||||||| ||||| || ||||||| |||| |||| Sbjct 461145 ACTATTGAATAGGCTATAGGAAATTCACTCTCCTCCTGACTAAGGG 461190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577037462534880