Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3494 228 1e-53 seq3367 223 5e-52 seq3227 219 7e-51 seq1563 219 7e-51 seq1269 215 8e-50 seq3802 205 1e-46 seq397 114 2e-19 >seq3494 Length=31386 Score = 228 bits (252), Expect = 1e-53 Identities = 197/244 (81%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 4363 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 4304 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 4303 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 4244 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||||| | ||||||| ||||||| |||| ||||| ||||| || ||||||| Sbjct 4243 GAGCCAGGCGGCAAGACTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 4184 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 4183 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 4124 Query 1485710 AAAC 1485713 | || Sbjct 4123 ACAC 4120 Score = 224 bits (248), Expect = 2e-52 Identities = 196/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 18119 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 18178 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 18179 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 18238 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||||| | ||||||| ||||||| |||| ||||| ||||| || ||||||| Sbjct 18239 GAGCCAGGCGGCAAGACTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 18298 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct 18299 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 18358 Query 1485710 AAAC 1485713 | || Sbjct 18359 ACAC 18362 >seq3367 Length=54809 Score = 223 bits (246), Expect = 5e-52 Identities = 201/253 (79%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1485461 TGGCATCGTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTT 1485520 ||||| | |||||||||||||||||||||| ||||| |||||||||||| ||||||| | Sbjct 7707 TGGCACTGGTGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCT 7766 Query 1485521 CGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCT 1485580 | ||| ||| || || || | ||||||||||||||| |||| | ||| ||| ||||| Sbjct 7767 CTCCGGGCAGGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCT 7826 Query 1485581 TGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAA 1485640 |||| |||||||||| |||||| || ||||||| |||| ||||| ||||| | Sbjct 7827 TGTTGTAATAAGCCAGGCGGCAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGA 7886 Query 1485641 ACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGA 1485700 | ||||||||||| ||| | ||| ||||||||| ||||||||| |||||||||| Sbjct 7887 AGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTGA 7946 Query 1485701 GCACCTTGTAAAC 1485713 |||||||||| || Sbjct 7947 GCACCTTGTACAC 7959 >seq3227 Length=64935 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 63998 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 63939 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 63938 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 63879 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || ||||||| |||| ||||| ||||| || ||||||| Sbjct 63878 GAGCCAGGCGGGAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 63819 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct 63818 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 63759 Query 1485710 AAAC 1485713 | || Sbjct 63758 ACAC 63755 >seq1563 Length=370006 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 143474 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 143533 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 143534 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 143593 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || ||||||| |||| ||||| ||||| || ||||||| Sbjct 143594 GAGCCAGGCGGGAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 143653 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct 143654 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 143713 Query 1485710 AAAC 1485713 | || Sbjct 143714 ACAC 143717 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 194268 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 194209 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 194208 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 194149 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || ||||||| |||| ||||| ||||| || ||||||| Sbjct 194148 GAGCCAGGCGGGAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 194089 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct 194088 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 194029 Query 1485710 AAAC 1485713 | || Sbjct 194028 ACAC 194025 Score = 181 bits (200), Expect = 2e-39 Identities = 189/248 (76%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 132246 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 132187 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 132186 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 132127 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || |||||| | ||| | | | || ||| ||||| ||||| || ||||||| Sbjct 132126 GAGCAAGGCGGGTAGACTCACCGGCAAAGCACTCGGAAATGTCATTGACGAAGGAGTTCA 132067 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||| ||||||||||||||||||| Sbjct 132066 TGATGCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 132007 Query 1485710 AAACAAAG 1485717 | ||| || Sbjct 132006 ACACATAG 131999 >seq1269 Length=507884 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 494275 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 494334 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 494335 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 494394 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || ||||||| |||| ||||| ||||| || ||||||| Sbjct 494395 GAGCCAGGCGGGAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 494454 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || ||||||||| ||||||||||||||||||| Sbjct 494455 TGATGCCCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGT 494514 Query 1485710 AAAC 1485713 | || Sbjct 494515 ACAC 494518 >seq3802 Length=30714 Score = 205 bits (226), Expect = 1e-46 Identities = 192/244 (79%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 25644 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 25703 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || | ||||||||||||||| |||| | ||| ||| ||||||||| Sbjct 25704 GGAGGAGTCGGATGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 25763 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| || ||||||| |||| ||||| ||||| || ||||||| Sbjct 25764 GAGCCAGGCGGGAAGCCTCGTTGGCGATGCGCTCGAAGATGTCATTGACGAAGGAGTTCA 25823 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||| ||||||||||||||||||| Sbjct 25824 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGG----ACCTGCTTGAGCACCTTGT 25879 Query 1485710 AAAC 1485713 | || Sbjct 25880 ACAC 25883 >seq397 Length=1286848 Score = 114 bits (126), Expect = 2e-19 Identities = 175/246 (71%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||| ||| ||||||| || ||| ||| Sbjct 453262 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCATGCTTGGCCAGCTCTCCGGGCA 453321 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | | | ||||||||||||| | || | ||| ||| || ||| || Sbjct 453322 GGAGAAGTCAGATGACGGTCTGGATCTCCCAGGAGGTGATGGTGGTGAACTTATTGTAAT 453381 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || | || | | | |||||| || | ||||| ||| | |||||||||| Sbjct 453382 GAGCCAAGCAGGAAGCTTAGCCGGTGATGCGCTCTAAGATGTCATTGGCGAACGAGTTCA 453441 Query 1485650 TGATCGACATCG-ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||| | ||| | || ||| | | |||| ||| |||||||||||| | Sbjct 453442 TGATGCTCATGGCCTTTAACGTGGA--CCCGCTT--TGGTGGACCCGCTTGAGCACCTCG 453497 Query 1485709 TAAACA 1485714 || ||| Sbjct 453498 TACACA 453503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913567037557532