Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17]
25,188 sequences; 2,053,867,363 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq13 84.2 2e-11
>seq13
Length=4293860
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/239 (68%), Gaps = 4/239 (2%)
Strand=Plus/Minus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
|||||||| || ||||||| ||||| ||||| || || || ||||| || ||| | ||
Sbjct 4013179 TAAGAGGTGGAA--TGCAAATCTTTGTAAAAACCTTGACTGGAAAAACAATCACCCTAGA 4013122
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
| |||| | | || || | | | || || |||||| || |||||||| |
Sbjct 4013121 AGTGGAGCCAAGTGACACCATTGAAAATGTGAAGGCCAAGATTCAAGACAAAGAAGGTAT 4013062
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722
||| || ||||| ||||| || | ||| || ||||||||||| || | | || |
Sbjct 4013061 TCCCCCAGACCAGCAAAGACTGATCTTTGCAGGAAAACAGCTGGAAGATGGCCGTACCTT 4013002
Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781
| | || || ||||| || || || ||||| ||||| | || || | || ||||||
Sbjct 4013001 GTCAGATTATAACATCCAGAAAGAATCTACTCTGCACCTTGTCCTGCGCTT--GAGGGG 4012945
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/210 (69%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
|||||||| || |||| || ||||| ||||| || || |||||||| ||||| | ||
Sbjct 4014091 TAAGAGGTGGAA--TGCAGATATTTGTAAAAACCTTGACTGGCAAAACAATTACTCTGGA 4014034
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
|||| | | || || | | | || || || ||| || |||||||| |
Sbjct 4014033 GGTGGAGCCAAGTGACACCATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAAGGTAT 4013974
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722
||| || |||||||| || || | ||| ||||||||||| || || | | || |
Sbjct 4013973 TCCCCCAGACCAGCAGAGGCTGATATTTGCCGGTAAACAGCTTGAAGATGGCCGCACCCT 4013914
Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTAC 107752
| |||||||||||||||||||| || ||
Sbjct 4013913 CTCAGACTACAACATTCAAAAGGAATCCAC 4013884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398754353298532
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |