Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq5 105 2e-19 seq94 102 3e-18 seq263 100 9e-18 seq573 98.7 3e-17 seq193 98.7 3e-17 seq56 98.7 3e-17 seq13 98.7 3e-17 seq1885 84.2 7e-13 >seq5 Length=5919612 Score = 105 bits (116), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 2758 CTGTGTTT-ATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGT 2815 |||||||| ||| || ||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 4858849 CTGTGTTTCATGAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGT 4858790 Query 2816 CCCTGGTTCAACCCCGGGCTTCAGC 2840 ||||||||| | |||||| ||| || Sbjct 4858789 CCCTGGTTCGATCCCGGGTTTCGGC 4858765 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4865288 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4865229 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4865228 CCGGGTTTCGGC 4865217 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4880293 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4880234 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4880233 CCGGGTTTCGGC 4880222 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4886918 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4886859 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4886858 CCGGGTTTCGGC 4886847 Score = 93.3 bits (102), Expect = 1e-15 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4869418 GCTGAAATAGCTCAGTTGGAAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 4869363 Score = 91.5 bits (100), Expect = 5e-15 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 4888515 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCC 4888461 >seq94 Length=2475795 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 221658 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 221599 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 221598 TCCCGGGTTTCGGC 221585 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 216860 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 216801 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 216800 CCGGGTTTCGGC 216789 >seq263 Length=1605742 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1372724 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1372783 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1372784 CCCGGGTTTCGGC 1372796 >seq573 Length=1034046 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 770221 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 770162 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 770161 CCGGGTTTCGGC 770150 >seq193 Length=1838271 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 844834 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 844775 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 844774 CCGGGTTTCGGC 844763 >seq56 Length=2911204 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 108546 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 108605 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 108606 CCGGGTTTCGGC 108617 >seq13 Length=4293860 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4025226 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4025167 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4025166 CCGGGTTTCGGC 4025155 >seq1885 Length=273794 Score = 84.2 bits (92), Expect = 7e-13 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCT-AAAGGTCCCTGGTTCAAC 2827 || ||| || ||||||||||||||||||||||||||||||| |||||||||||| || | Sbjct 168725 GCCGAAATACCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAAGGTCCCTGGCTCGAT 168784 Query 2828 CCCGGGCTTCAGC 2840 ||| || ||| || Sbjct 168785 CCCAGGTTTCGGC 168797 Score = 80.6 bits (88), Expect = 8e-12 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||| || |||||||||||||||||| |||||| |||||||||||||||||| ||| | | Sbjct 167139 GCTAAAATAGCTCAGTTGGGAGAGCGTTAGACAAAAGATCTAAAGGTCCCTGATTCGATC 167198 Query 2829 CCGGGCTTC 2837 | ||| ||| Sbjct 167199 CTGGGTTTC 167207 Score = 80.6 bits (88), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCT-AAAGGTCCCTGGTTCAA 2826 ||| ||| || ||||||||||||||| ||||||||||||||| ||||||||||| ||||| Sbjct 167460 GGCCGAAATAACTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAAGGTCCCTGATTCAA 167519 Query 2827 CCCCGGGCTTCAGC 2840 || || ||| || Sbjct 167520 TCCTGGTTTTCGGC 167533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845233534260