Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3494 188 1e-41 seq3367 179 5e-39 seq1563 179 5e-39 seq1269 179 5e-39 seq3227 176 6e-38 seq3802 168 1e-35 seq397 93.3 6e-13 >seq3494 Length=31386 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||||||||||||||||||| |||| |||| ||| |||| ||||| Sbjct 4123 TACAAGGTGCTCAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 4176 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| ||||||| | | ||| Sbjct 4177 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCACCGAGTCTTGCCGC 4236 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 4237 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 4296 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 4297 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 4345 Score = 185 bits (204), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 18359 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 18306 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| ||||||| | | ||| Sbjct 18305 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCACCGAGTCTTGCCGC 18246 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 18245 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 18186 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 18185 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 18137 >seq3367 Length=54809 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 7956 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 7903 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| || |||||| | ||| Sbjct 7902 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTGCCGC 7843 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 7842 CTGGCTTATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 7783 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 7782 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7734 >seq1563 Length=370006 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 143714 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 143661 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| || |||||| ||| Sbjct 143660 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTCCCGC 143601 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 143600 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 143541 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 143540 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 143492 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 194028 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 194081 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| || |||||| ||| Sbjct 194082 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTCCCGC 194141 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 194142 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 194201 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 194202 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 194250 Score = 140 bits (154), Expect = 5e-27 Identities = 169/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| || |||| ||||| Sbjct 132006 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCATCCAAGGCCATG 132059 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| ||| || | | | ||| | ||| Sbjct 132060 GGCATCATGAACTCCTTCGTCAATGACATTTCCGAGTGCTTTGCCGGTGAGTCTACCCGC 132119 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || || | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 132120 CTTGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 132179 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 132180 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 132228 >seq1269 Length=507884 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| | ||| ||| |||| ||||| Sbjct 494515 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 494462 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| || |||||| ||| Sbjct 494461 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTCCCGC 494402 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 494401 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 494342 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 494341 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 494293 >seq3227 Length=64935 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 63758 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 63811 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| ||||||| || |||||| ||| Sbjct 63812 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTCCCGC 63871 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 63872 CTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCGA 63931 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| |||||||||||| |||||||||| Sbjct 63932 CTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCGGAGGGCACCA 63980 >seq3802 Length=30714 Score = 168 bits (186), Expect = 1e-35 Identities = 177/230 (77%), Gaps = 12/230 (5%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGA-ACCGTTGGGCCATCCTCCAACAAGTCCAT 724972 |||||||||||||||||||| ||||| |||| |||| ||| |||| |||| Sbjct 25880 TACAAGGTGCTCAAGCAGGT-----CCCGACACCGG-----CATC-TCCTCCAAGGCCAT 25832 Query 724973 GTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCG 725032 | ||||||||||| || ||||| ||||| |||| ||||||| || |||||| || Sbjct 25831 GGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAACGAGGCTTCCCG 25772 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 |||||| | | |||||||||| ||| ||| | | || ||||||||||||||| | || Sbjct 25771 CCTGGCTCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCATCCG 25712 Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 25711 ACTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 25662 >seq397 Length=1286848 Score = 93.3 bits (102), Expect = 6e-13 Identities = 159/229 (69%), Gaps = 9/229 (4%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||| |||||||||||| ||| |||| || || || ||| | ||| ||||| Sbjct 453499 TACGAGGTGCTCAAGCGGGTCCACCA---AAGCG---GG---TCCACGTTAAAGGCCATG 453449 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| | ||| ||||| | || |||||| | | | || || Sbjct 453448 AGCATCATGAACTCGTTCGCCAATGACATCTTAGAGCGCATCACCGGCTAAGCTTCCTGC 453389 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | | ||| ||| || ||| ||| | | | ||||||||||||| | | | Sbjct 453388 TTGGCTCATTACAATAAGTTCACCACCATCACCTCCTGGGAGATCCAGACCGTCATCTGA 453329 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| ||| || ||||||| ||| ||||||||||||||||||| Sbjct 453328 CTTCTCCTGCCCGGAGAGCTGGCCAAGCATGCCGTCTCCGAGGGCACCA 453280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175381771104456