Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq425 120 4e-22 seq16 93.3 6e-14 seq67 91.5 2e-13 seq3383 89.7 7e-13 >seq425 Length=1236905 Score = 120 bits (132), Expect = 4e-22 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| || |||| ||| ||||| |||||||| |||||||| | || ||||| | Sbjct 157411 CCTCATCTCTGCTGATTAGTTCATTAGAGAATGTGAGACCAGGCATCAACCCTCGCTTCT 157470 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||| || ||||| ||||| |||||||| || ||||| || || || || ||||||| Sbjct 157471 TCAGCCAGAAGATGGCTGCAAATGATCCAGAGAAAAAGATTCCCTCCACAGCAGCAAATG 157530 Query 39759 CAAC 39762 |||| Sbjct 157531 CAAC 157534 Score = 86.0 bits (94), Expect = 9e-12 Identities = 104/140 (74%), Gaps = 5/140 (4%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCT----TCTTGTGACATAACTCCCATT 39325 |||| ||||| |||||| || || | || || ||||| ||||| || ||||| Sbjct 155306 TTTAGAAGTCCGCATCTAGAGTGAATTTATGGTCCGATGTCTTG-GACATGACCCCCATC 155364 Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || || ||||||||||| ||||| || ||||| || || ||||||| ||| || || Sbjct 155365 TTCTGATATTCACCAACTTTCTTCTCAAAGAAATTGGTCTTCCCTTCCAGTGAAATGTTC 155424 Query 39386 TCCATGAAATCAAACGGATT 39405 |||||||| ||||| ||||| Sbjct 155425 TCCATGAAGTCAAATGGATT 155444 >seq16 Length=4132212 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| |||| || || | || || || || ||||| || ||||| ||||| | ||| | Sbjct 2457840 CCTCGTCTCGGCTGATGAGCTCATTGGAGAAGGTGAGACCGGGCATCAGACCTCTCTTCT 2457899 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | ||| || | |||||||| || |||||||||||||| |||||||| || ||||| | Sbjct 2457900 TCAACCAGAAAACAGCAGCAAAGGAGCCAGAAAAGAAGATTCCTTCTACCGCGGCAAACG 2457959 Query 39759 CAACAAGTCTCTCTCC 39774 | || | || ||||| Sbjct 2457960 CCACCACTCGTTCTCC 2457975 >seq67 Length=2748889 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/279 (67%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 39711 TGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCT 39770 |||| ||||| || |||| | ||||| || || || || ||||||||||| | | || Sbjct 1060383 TGGCTGCAAATGACTCAGAGGAAAAGATTCCCTCCACAGCAGCAAATGCAACCACACACT 1060442 Query 39771 CTCCGTAACTTGTATCATT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTA 39827 | | || ||| || || | ||| | | ||| ||| ||||| ||||| || | Sbjct 1060443 CACTATAGGTTGCATTGTTGTCACTAATCTAGCTGAGTGTCCATTCAGCCTTCTTTTTCA 1060502 Query 39828 CACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACA- 39886 ||||||||| ||||| || |||| || | | | | || | |||||||| | Sbjct 1060503 CACAAGGCAGAGTTTCAATTACATTGAACAAGAACTTCCTCTCCTTGGGATCTTTAAAAC 1060562 Query 39887 ----TATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTG 39942 ||||| || || | || |||||||| || | ||| ||||| || || || || || Sbjct 1060563 CCAGTATGTGTCAATCAGAAGGCTATACATCTCCGGATGAATGTTCTCTATTGCAATTTG 1060622 Query 39943 AAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 ||| || || ||||| | ||||| || | |||||| || Sbjct 1060623 AAAGCCATAGAAACAGCACGCTTCTGTGACTTGTACTTC 1060661 >seq3383 Length=54064 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 ||||||||||| || || || || || || || || || || ||||| || ||||| | Sbjct 36648 ATCTCTGTACACAGGTTGCTGCACTTTATGGTGCCGAGGTTCTGCTGGTTGCTCTTGCGG 36589 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 ||||||||||| ||||| | || | ||||| |||||||| |||||||||| || || Sbjct 36588 TTACAGGCGTCTTTGTATAACATGTAAGGAGTGCCAGTTTCTGTCTGAGATTCCATGAT 36530 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct 30701 GTGCCGGCATTGAACAGGGTGGGAGAGGCGTGTGTGAACCATTTCTCAGACAGCAGATTG 30642 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || ||||| || || | |||||| || | || ||||| | | || | ||| | | Sbjct 30641 TACGTTTCTATGGCCGCTTCTATGTCGTTTTTGTGGATTCCGACAGACACCCTCATGAGC 30582 Query 70111 ATATGCTGAGGTCGTTCTACC 70131 || ||||| || |||||| || Sbjct 30581 ATGTGCTGGGGACGTTCTGCC 30561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686692526764320