Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1240 120 2e-22 >seq1240 Length=519700 Score = 120 bits (132), Expect = 2e-22 Identities = 124/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || || | ||| || ||||| || || | || | ||||| || ||||| |||||||| Sbjct 48916 CCTGTAACGTGAGCGATCATATAGGTTAATAAAGCATAACTGGCTATGTTGAATGGCACT 48975 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATT-TTGTGACAC 111896 ||||||||||||||||||||||| || ||||||||||| || | || ||| ||| || || Sbjct 48976 CCTAGGCCCATATCTCCCGATCTCTGGTATAGCTGACACGACAATTCATTGTTGAGA-AC 49034 Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || ||||| |||| || || || | ||||||| Sbjct 49035 ATAGAACTGGCAAAGAGCATGGCATGGGGGAAGTGCCATC 49074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391825281029644