Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq55 109 6e-19 seq37 82.4 8e-11 >seq55 Length=2924215 Score = 109 bits (120), Expect = 6e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| ||||| |||| ||| |||||||| ||||||||| || | ||||| || || Sbjct 2683492 GTGAAGATGTATCGAGGGCTGGCAGCATCTTTGCCACCATGCAGTCTGGTACCAAACTGA 2683433 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| |||||| |||||||| | ||||||| ||||||||||| || |||||||||| | Sbjct 2683432 CCAATCGGCTGTAAGAGGTTGATGTTGTTGCTACCCACAAAGTTCTGTGCCAAGTTGATA 2683373 Query 117425 ATCGT 117429 || || Sbjct 2683372 ATGGT 2683368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | |||||| ||||| |||||||| ||| | || |||||||| Sbjct 2683492 GTGAAGATGTATCGAGGGCTGGCAGCATCTTTGCCACCATGCAGTCTGGTACCAAACTGA 2683433 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| |||| | |||||||| ||||||| ||||| || ||||| ||||| || | | Sbjct 2683432 CCAATCGGCTGTAAGAGGTTGATGTTGTTGCTACCCACAAAGTTCTGTGCCAAGTTGATA 2683373 Query 152149 ATCGT 152153 || || Sbjct 2683372 ATGGT 2683368 >seq37 Length=3187252 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||| || | |||||| ||||| |||||||| ||| || || |||||||| Sbjct 664030 GTGAAGATGTAACGAGGGCTGGCAGCATCTTTGCCACCATGCAGACGTGTACCAAACTGA 663971 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| ||||| || | | | | || || || || |||||||| ||||| |||||| Sbjct 663970 CCAATGGGCTGCAGTAAGCTCACATTATTACTTCCAACAAAATTCTGTGCCAAGTTCACA 663911 Query 152149 ATCGT 152153 || || Sbjct 663910 ATAGT 663906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547043709042400